Protein–RNA interactions for Protein: P36222

CHI3L1, Chitinase-3-like protein 1, humanhuman

Predicted RBP Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHI3L1P36222 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHI3L1P36222 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.85□□□□□ -0.19
CHI3L1P36222 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.85□□□□□ -0.19
CHI3L1P36222 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CHI3L1P36222 REXO1L1P-201ENST00000379010 6598 ntBASIC13.85□□□□□ -0.19
CHI3L1P36222 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC13.85□□□□□ -0.19
CHI3L1P36222 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CHI3L1P36222 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
CHI3L1P36222 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHI3L1P36222 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.85□□□□□ -0.19
CHI3L1P36222 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHI3L1P36222 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CHI3L1P36222 DGCR5-201ENST00000399539 862 ntBASIC13.85□□□□□ -0.19
CHI3L1P36222 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC13.85□□□□□ -0.19
CHI3L1P36222 ACTG1P3-201ENST00000431775 1114 ntBASIC13.85□□□□□ -0.19
CHI3L1P36222 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.85□□□□□ -0.19
CHI3L1P36222 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC13.85□□□□□ -0.19
CHI3L1P36222 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC13.85□□□□□ -0.19
CHI3L1P36222 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CHI3L1P36222 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13.85□□□□□ -0.19
CHI3L1P36222 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.85□□□□□ -0.19
CHI3L1P36222 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC13.85□□□□□ -0.19
CHI3L1P36222 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.85□□□□□ -0.19
CHI3L1P36222 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC13.85□□□□□ -0.19
CHI3L1P36222 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHI3L1P36222 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
CHI3L1P36222 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHI3L1P36222 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CHI3L1P36222 KHSRPP1-201ENST00000427983 1768 ntBASIC13.85□□□□□ -0.19
CHI3L1P36222 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CHI3L1P36222 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHI3L1P36222 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CHI3L1P36222 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.85□□□□□ -0.19
CHI3L1P36222 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHI3L1P36222 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
CHI3L1P36222 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHI3L1P36222 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CHI3L1P36222 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHI3L1P36222 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CHI3L1P36222 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC13.85□□□□□ -0.19
CHI3L1P36222 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHI3L1P36222 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
CHI3L1P36222 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHI3L1P36222 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CHI3L1P36222 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CHI3L1P36222 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHI3L1P36222 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.84□□□□□ -0.19
CHI3L1P36222 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHI3L1P36222 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CHI3L1P36222 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHI3L1P36222 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHI3L1P36222 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CHI3L1P36222 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.84□□□□□ -0.19
CHI3L1P36222 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC13.84□□□□□ -0.19
CHI3L1P36222 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHI3L1P36222 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CHI3L1P36222 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC13.84□□□□□ -0.19
CHI3L1P36222 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CHI3L1P36222 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.84□□□□□ -0.19
CHI3L1P36222 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHI3L1P36222 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
CHI3L1P36222 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CHI3L1P36222 WDR53-203ENST00000429115 683 ntTSL 2 BASIC13.84□□□□□ -0.19
CHI3L1P36222 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHI3L1P36222 AL355864.2-201ENST00000447420 863 ntBASIC13.84□□□□□ -0.19
CHI3L1P36222 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC13.84□□□□□ -0.19
CHI3L1P36222 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
CHI3L1P36222 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
CHI3L1P36222 SORD2P-201ENST00000558556 1069 ntBASIC13.84□□□□□ -0.19
CHI3L1P36222 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC13.84□□□□□ -0.19
CHI3L1P36222 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CHI3L1P36222 MIR5189-201ENST00000577370 114 ntBASIC13.84□□□□□ -0.19
CHI3L1P36222 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC13.84□□□□□ -0.19
CHI3L1P36222 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC13.84□□□□□ -0.19
CHI3L1P36222 AC010319.3-201ENST00000597028 470 ntBASIC13.84□□□□□ -0.19
CHI3L1P36222 YTHDF3-AS1-201ENST00000603538 718 ntBASIC13.84□□□□□ -0.19
CHI3L1P36222 AP001002.3-201ENST00000623482 206 ntBASIC13.84□□□□□ -0.19
CHI3L1P36222 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.84□□□□□ -0.19
CHI3L1P36222 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CHI3L1P36222 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHI3L1P36222 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHI3L1P36222 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHI3L1P36222 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHI3L1P36222 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CHI3L1P36222 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHI3L1P36222 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHI3L1P36222 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHI3L1P36222 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHI3L1P36222 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHI3L1P36222 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CHI3L1P36222 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC13.84□□□□□ -0.19
CHI3L1P36222 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHI3L1P36222 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
CHI3L1P36222 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CHI3L1P36222 MBLAC2-202ENST00000514906 1936 ntBASIC13.84□□□□□ -0.19
CHI3L1P36222 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CHI3L1P36222 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHI3L1P36222 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CHI3L1P36222 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CHI3L1P36222 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms