Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC13.19□□□□□ -0.3
FREM3P0C091 AC116345.2-201ENST00000512837 523 ntBASIC13.19□□□□□ -0.3
FREM3P0C091 IGHVIII-5-2-201ENST00000522505 261 ntBASIC13.19□□□□□ -0.3
FREM3P0C091 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC13.19□□□□□ -0.3
FREM3P0C091 AL022334.2-201ENST00000610000 484 ntBASIC13.19□□□□□ -0.3
FREM3P0C091 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
FREM3P0C091 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
FREM3P0C091 AGGF1P1-201ENST00000509500 2073 ntBASIC13.19□□□□□ -0.3
FREM3P0C091 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
FREM3P0C091 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
FREM3P0C091 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
FREM3P0C091 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC13.19□□□□□ -0.3
FREM3P0C091 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
FREM3P0C091 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.19□□□□□ -0.3
FREM3P0C091 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
FREM3P0C091 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
FREM3P0C091 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.19□□□□□ -0.3
FREM3P0C091 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
FREM3P0C091 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
FREM3P0C091 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
FREM3P0C091 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
FREM3P0C091 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC13.18□□□□□ -0.3
FREM3P0C091 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
FREM3P0C091 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
FREM3P0C091 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
FREM3P0C091 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
FREM3P0C091 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC13.18□□□□□ -0.3
FREM3P0C091 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.18□□□□□ -0.3
FREM3P0C091 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
FREM3P0C091 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
FREM3P0C091 UFM1-202ENST00000379649 846 ntTSL 4 BASIC13.18□□□□□ -0.3
FREM3P0C091 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
FREM3P0C091 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
FREM3P0C091 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC13.18□□□□□ -0.3
FREM3P0C091 AC026803.1-201ENST00000569130 274 ntBASIC13.18□□□□□ -0.3
FREM3P0C091 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
FREM3P0C091 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.18□□□□□ -0.3
FREM3P0C091 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
FREM3P0C091 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
FREM3P0C091 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC13.18□□□□□ -0.3
FREM3P0C091 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
FREM3P0C091 KRT8P28-201ENST00000433288 1390 ntBASIC13.18□□□□□ -0.3
FREM3P0C091 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
FREM3P0C091 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.18□□□□□ -0.3
FREM3P0C091 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
FREM3P0C091 CICP16-201ENST00000502609 2813 ntBASIC13.18□□□□□ -0.3
FREM3P0C091 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC13.18□□□□□ -0.3
FREM3P0C091 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
FREM3P0C091 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
FREM3P0C091 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.18□□□□□ -0.3
FREM3P0C091 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
FREM3P0C091 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.18□□□□□ -0.3
FREM3P0C091 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
FREM3P0C091 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
FREM3P0C091 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
FREM3P0C091 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
FREM3P0C091 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC13.18□□□□□ -0.3
FREM3P0C091 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
FREM3P0C091 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.18□□□□□ -0.3
FREM3P0C091 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC13.18□□□□□ -0.3
FREM3P0C091 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
FREM3P0C091 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
FREM3P0C091 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
FREM3P0C091 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
FREM3P0C091 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC13.18□□□□□ -0.3
FREM3P0C091 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
FREM3P0C091 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
FREM3P0C091 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
FREM3P0C091 AL662890.1-201ENST00000396818 632 ntBASIC13.18□□□□□ -0.3
FREM3P0C091 SLC25A24P2-201ENST00000415059 510 ntBASIC13.18□□□□□ -0.3
FREM3P0C091 AC007274.2-201ENST00000421675 662 ntBASIC13.18□□□□□ -0.3
FREM3P0C091 FTLP1-201ENST00000449155 526 ntBASIC13.18□□□□□ -0.3
FREM3P0C091 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC13.18□□□□□ -0.3
FREM3P0C091 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC13.18□□□□□ -0.3
FREM3P0C091 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
FREM3P0C091 AC022447.6-201ENST00000515522 438 ntBASIC13.18□□□□□ -0.3
FREM3P0C091 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC13.18□□□□□ -0.3
FREM3P0C091 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.18□□□□□ -0.3
FREM3P0C091 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC13.18□□□□□ -0.3
FREM3P0C091 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC13.18□□□□□ -0.3
FREM3P0C091 SNORD3B-2-202ENST00000571722 791 ntBASIC13.18□□□□□ -0.3
FREM3P0C091 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC13.18□□□□□ -0.3
FREM3P0C091 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC13.18□□□□□ -0.3
FREM3P0C091 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
FREM3P0C091 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
FREM3P0C091 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
FREM3P0C091 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
FREM3P0C091 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.17□□□□□ -0.3
FREM3P0C091 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
FREM3P0C091 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
FREM3P0C091 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
FREM3P0C091 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
FREM3P0C091 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC13.17□□□□□ -0.3
FREM3P0C091 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
FREM3P0C091 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.17□□□□□ -0.3
FREM3P0C091 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.17□□□□□ -0.3
FREM3P0C091 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
FREM3P0C091 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
FREM3P0C091 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
FREM3P0C091 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms