Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RB1P06400 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC15.21■□□□□ 0.03
RB1P06400 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC15.21■□□□□ 0.03
RB1P06400 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.21■□□□□ 0.03
RB1P06400 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RB1P06400 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RB1P06400 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RB1P06400 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RB1P06400 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
RB1P06400 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RB1P06400 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.21■□□□□ 0.03
RB1P06400 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RB1P06400 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RB1P06400 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RB1P06400 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
RB1P06400 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RB1P06400 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RB1P06400 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RB1P06400 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RB1P06400 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC15.21■□□□□ 0.03
RB1P06400 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RB1P06400 MIR566-201ENST00000385187 94 ntBASIC15.21■□□□□ 0.03
RB1P06400 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RB1P06400 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RB1P06400 RN7SL788P-201ENST00000460504 316 ntBASIC15.21■□□□□ 0.03
RB1P06400 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC15.21■□□□□ 0.03
RB1P06400 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC15.21■□□□□ 0.03
RB1P06400 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC15.21■□□□□ 0.03
RB1P06400 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
RB1P06400 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC15.21■□□□□ 0.03
RB1P06400 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC15.21■□□□□ 0.03
RB1P06400 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RB1P06400 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC15.21■□□□□ 0.03
RB1P06400 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC15.21■□□□□ 0.03
RB1P06400 AC068831.5-201ENST00000557387 328 ntBASIC15.21■□□□□ 0.03
RB1P06400 USB1-205ENST00000561743 1135 ntTSL 3 BASIC15.21■□□□□ 0.03
RB1P06400 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC15.21■□□□□ 0.03
RB1P06400 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RB1P06400 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC15.21■□□□□ 0.03
RB1P06400 AC067930.6-201ENST00000623257 4947 ntBASIC15.21■□□□□ 0.03
RB1P06400 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.21■□□□□ 0.03
RB1P06400 HYMAI-201ENST00000635591 3347 ntBASIC15.21■□□□□ 0.03
RB1P06400 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.02
RB1P06400 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC15.21■□□□□ 0.02
RB1P06400 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.21■□□□□ 0.02
RB1P06400 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RB1P06400 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RB1P06400 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RB1P06400 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
RB1P06400 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
RB1P06400 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
RB1P06400 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.21■□□□□ 0.02
RB1P06400 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RB1P06400 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC15.2■□□□□ 0.02
RB1P06400 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.2■□□□□ 0.02
RB1P06400 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.2■□□□□ 0.02
RB1P06400 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RB1P06400 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RB1P06400 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RB1P06400 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
RB1P06400 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RB1P06400 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RB1P06400 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RB1P06400 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RB1P06400 AC136621.1-201ENST00000624017 2304 ntBASIC15.2■□□□□ 0.02
RB1P06400 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.2■□□□□ 0.02
RB1P06400 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RB1P06400 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RB1P06400 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RB1P06400 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RB1P06400 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
RB1P06400 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
RB1P06400 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
RB1P06400 AP000354.1-201ENST00000396982 456 ntBASIC15.2■□□□□ 0.02
RB1P06400 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
RB1P06400 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC15.2■□□□□ 0.02
RB1P06400 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC15.2■□□□□ 0.02
RB1P06400 AC083801.1-201ENST00000491689 358 ntBASIC15.2■□□□□ 0.02
RB1P06400 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC15.2■□□□□ 0.02
RB1P06400 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC15.2■□□□□ 0.02
RB1P06400 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RB1P06400 FOXN3-AS2-201ENST00000554071 1262 ntBASIC15.2■□□□□ 0.02
RB1P06400 AC013553.1-201ENST00000560906 267 ntBASIC15.2■□□□□ 0.02
RB1P06400 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RB1P06400 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC15.2■□□□□ 0.02
RB1P06400 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC15.2■□□□□ 0.02
RB1P06400 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC15.2■□□□□ 0.02
RB1P06400 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RB1P06400 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.2■□□□□ 0.02
RB1P06400 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
RB1P06400 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.2■□□□□ 0.02
RB1P06400 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
RB1P06400 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RB1P06400 AC126755.1-201ENST00000525846 6405 ntBASIC15.2■□□□□ 0.02
RB1P06400 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
RB1P06400 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RB1P06400 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RB1P06400 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RB1P06400 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RB1P06400 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms