Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC17.37■□□□□ 0.37
CHGBP05060 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHGBP05060 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHGBP05060 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC17.37■□□□□ 0.37
CHGBP05060 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHGBP05060 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHGBP05060 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CHGBP05060 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHGBP05060 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC17.37■□□□□ 0.37
CHGBP05060 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CHGBP05060 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHGBP05060 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
CHGBP05060 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
CHGBP05060 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC17.36■□□□□ 0.37
CHGBP05060 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHGBP05060 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CHGBP05060 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC17.36■□□□□ 0.37
CHGBP05060 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC17.36■□□□□ 0.37
CHGBP05060 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC17.36■□□□□ 0.37
CHGBP05060 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHGBP05060 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHGBP05060 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
CHGBP05060 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC17.36■□□□□ 0.37
CHGBP05060 RNA5SP359-201ENST00000364838 113 ntBASIC17.36■□□□□ 0.37
CHGBP05060 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHGBP05060 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHGBP05060 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHGBP05060 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC17.36■□□□□ 0.37
CHGBP05060 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC17.36■□□□□ 0.37
CHGBP05060 NUP210P1-202ENST00000504322 710 ntBASIC17.36■□□□□ 0.37
CHGBP05060 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC17.36■□□□□ 0.37
CHGBP05060 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CHGBP05060 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC17.36■□□□□ 0.37
CHGBP05060 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC17.36■□□□□ 0.37
CHGBP05060 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC17.36■□□□□ 0.37
CHGBP05060 AC007718.1-201ENST00000621078 280 ntBASIC17.36■□□□□ 0.37
CHGBP05060 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC17.36■□□□□ 0.37
CHGBP05060 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CHGBP05060 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CHGBP05060 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC17.36■□□□□ 0.37
CHGBP05060 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHGBP05060 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHGBP05060 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC17.36■□□□□ 0.37
CHGBP05060 LAP3P2-201ENST00000454686 1454 ntBASIC17.36■□□□□ 0.37
CHGBP05060 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC17.36■□□□□ 0.37
CHGBP05060 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC17.36■□□□□ 0.37
CHGBP05060 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHGBP05060 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC17.36■□□□□ 0.37
CHGBP05060 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CHGBP05060 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC17.36■□□□□ 0.37
CHGBP05060 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHGBP05060 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHGBP05060 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CHGBP05060 CCT8L1P-201ENST00000465400 1674 ntBASIC17.36■□□□□ 0.37
CHGBP05060 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHGBP05060 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.35■□□□□ 0.37
CHGBP05060 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CHGBP05060 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHGBP05060 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
CHGBP05060 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHGBP05060 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.35■□□□□ 0.37
CHGBP05060 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHGBP05060 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHGBP05060 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC17.35■□□□□ 0.37
CHGBP05060 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHGBP05060 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC17.35■□□□□ 0.37
CHGBP05060 AC091046.1-201ENST00000331871 207 ntBASIC17.35■□□□□ 0.37
CHGBP05060 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHGBP05060 OR2K2-202ENST00000374428 1038 ntBASIC17.35■□□□□ 0.37
CHGBP05060 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC17.35■□□□□ 0.37
CHGBP05060 IMP3P2-201ENST00000489760 475 ntBASIC17.35■□□□□ 0.37
CHGBP05060 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC17.35■□□□□ 0.37
CHGBP05060 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC17.35■□□□□ 0.37
CHGBP05060 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC17.35■□□□□ 0.37
CHGBP05060 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHGBP05060 RERG-205ENST00000537647 935 ntTSL 2 BASIC17.35■□□□□ 0.37
CHGBP05060 MIR3619-201ENST00000579667 83 ntBASIC17.35■□□□□ 0.37
CHGBP05060 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC17.35■□□□□ 0.37
CHGBP05060 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC17.35■□□□□ 0.37
CHGBP05060 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC17.35■□□□□ 0.37
CHGBP05060 AC138627.1-207ENST00000641560 1006 ntBASIC17.35■□□□□ 0.37
CHGBP05060 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHGBP05060 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHGBP05060 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CHGBP05060 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC17.35■□□□□ 0.37
CHGBP05060 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHGBP05060 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHGBP05060 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CHGBP05060 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
CHGBP05060 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CHGBP05060 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHGBP05060 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHGBP05060 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC17.35■□□□□ 0.37
CHGBP05060 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHGBP05060 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHGBP05060 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CHGBP05060 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC17.34■□□□□ 0.37
CHGBP05060 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHGBP05060 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHGBP05060 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms