Protein–RNA interactions for Protein: O95347

SMC2, Structural maintenance of chromosomes protein 2, humanhuman

Predictions only

Length 1,197 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2O95347 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SMC2O95347 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC16.54■□□□□ 0.24
SMC2O95347 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC16.54■□□□□ 0.24
SMC2O95347 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SMC2O95347 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SMC2O95347 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
SMC2O95347 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SMC2O95347 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SMC2O95347 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
SMC2O95347 AC099521.3-201ENST00000624251 2938 ntBASIC16.53■□□□□ 0.24
SMC2O95347 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
SMC2O95347 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SMC2O95347 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SMC2O95347 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
SMC2O95347 FKBP4P6-201ENST00000457486 1332 ntBASIC16.53■□□□□ 0.24
SMC2O95347 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SMC2O95347 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SMC2O95347 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
SMC2O95347 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC16.53■□□□□ 0.24
SMC2O95347 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC16.53■□□□□ 0.24
SMC2O95347 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC16.53■□□□□ 0.24
SMC2O95347 POM121L8P-201ENST00000417732 1281 ntBASIC16.53■□□□□ 0.24
SMC2O95347 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.53■□□□□ 0.24
SMC2O95347 POM121L9P-203ENST00000441984 1285 ntBASIC16.53■□□□□ 0.24
SMC2O95347 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
SMC2O95347 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SMC2O95347 FTLP10-202ENST00000505798 471 ntBASIC16.53■□□□□ 0.24
SMC2O95347 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.53■□□□□ 0.24
SMC2O95347 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SMC2O95347 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC16.53■□□□□ 0.24
SMC2O95347 BX088702.1-201ENST00000610784 235 ntBASIC16.53■□□□□ 0.24
SMC2O95347 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.53■□□□□ 0.24
SMC2O95347 AC145423.3-201ENST00000615987 467 ntBASIC16.53■□□□□ 0.24
SMC2O95347 MEX3B-202ENST00000558133 4333 ntBASIC16.53■□□□□ 0.24
SMC2O95347 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SMC2O95347 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SMC2O95347 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC16.53■□□□□ 0.24
SMC2O95347 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SMC2O95347 KHSRPP1-201ENST00000427983 1768 ntBASIC16.53■□□□□ 0.24
SMC2O95347 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SMC2O95347 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SMC2O95347 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
SMC2O95347 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SMC2O95347 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SMC2O95347 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SMC2O95347 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SMC2O95347 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SMC2O95347 DGCR9-201ENST00000609630 2415 ntBASIC16.53■□□□□ 0.24
SMC2O95347 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SMC2O95347 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
SMC2O95347 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SMC2O95347 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SMC2O95347 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
SMC2O95347 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SMC2O95347 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SMC2O95347 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SMC2O95347 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SMC2O95347 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SMC2O95347 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SMC2O95347 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SMC2O95347 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
SMC2O95347 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC16.52■□□□□ 0.24
SMC2O95347 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC16.52■□□□□ 0.24
SMC2O95347 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.52■□□□□ 0.24
SMC2O95347 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SMC2O95347 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SMC2O95347 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SMC2O95347 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SMC2O95347 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16.52■□□□□ 0.24
SMC2O95347 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
SMC2O95347 TMEM198B-204ENST00000484016 896 ntBASIC16.52■□□□□ 0.24
SMC2O95347 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.52■□□□□ 0.24
SMC2O95347 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.52■□□□□ 0.24
SMC2O95347 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC16.52■□□□□ 0.24
SMC2O95347 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC16.52■□□□□ 0.24
SMC2O95347 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.52■□□□□ 0.24
SMC2O95347 RN7SL48P-201ENST00000579283 293 ntBASIC16.52■□□□□ 0.24
SMC2O95347 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SMC2O95347 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SMC2O95347 HPD-204ENST00000543163 1709 ntTSL 5 BASIC16.52■□□□□ 0.24
SMC2O95347 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.24
SMC2O95347 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
SMC2O95347 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SMC2O95347 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC16.52■□□□□ 0.23
SMC2O95347 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SMC2O95347 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC16.52■□□□□ 0.23
SMC2O95347 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SMC2O95347 AC020910.5-201ENST00000623668 1865 ntBASIC16.52■□□□□ 0.23
SMC2O95347 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
SMC2O95347 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
SMC2O95347 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC16.52■□□□□ 0.23
SMC2O95347 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
SMC2O95347 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
SMC2O95347 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
SMC2O95347 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
SMC2O95347 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC16.51■□□□□ 0.23
SMC2O95347 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMC2O95347 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMC2O95347 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SMC2O95347 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms