Protein–RNA interactions for Protein: O75473

LGR5, Leucine-rich repeat-containing G-protein coupled receptor 5, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5O75473 AC009560.1-201ENST00000620208 434 ntBASIC16.1■□□□□ 0.17
LGR5O75473 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
LGR5O75473 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC16.1■□□□□ 0.17
LGR5O75473 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
LGR5O75473 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC16.1■□□□□ 0.17
LGR5O75473 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC16.1■□□□□ 0.17
LGR5O75473 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LGR5O75473 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LGR5O75473 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LGR5O75473 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC16.1■□□□□ 0.17
LGR5O75473 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC16.1■□□□□ 0.17
LGR5O75473 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LGR5O75473 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC16.1■□□□□ 0.17
LGR5O75473 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LGR5O75473 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
LGR5O75473 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
LGR5O75473 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC16.1■□□□□ 0.17
LGR5O75473 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LGR5O75473 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
LGR5O75473 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC16.09■□□□□ 0.17
LGR5O75473 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LGR5O75473 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
LGR5O75473 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LGR5O75473 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LGR5O75473 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
LGR5O75473 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LGR5O75473 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
LGR5O75473 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LGR5O75473 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.09■□□□□ 0.17
LGR5O75473 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC16.09■□□□□ 0.17
LGR5O75473 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC16.09■□□□□ 0.17
LGR5O75473 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
LGR5O75473 AL355334.1-201ENST00000417713 215 ntBASIC16.09■□□□□ 0.17
LGR5O75473 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC16.09■□□□□ 0.17
LGR5O75473 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC16.09■□□□□ 0.17
LGR5O75473 NAGK-204ENST00000443872 878 ntTSL 3 BASIC16.09■□□□□ 0.17
LGR5O75473 RPL7P35-201ENST00000446943 740 ntBASIC16.09■□□□□ 0.17
LGR5O75473 RN7SL277P-201ENST00000481521 288 ntBASIC16.09■□□□□ 0.17
LGR5O75473 RN7SL818P-201ENST00000485099 259 ntBASIC16.09■□□□□ 0.17
LGR5O75473 NDUFS6P1-201ENST00000485187 316 ntBASIC16.09■□□□□ 0.17
LGR5O75473 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LGR5O75473 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC16.09■□□□□ 0.17
LGR5O75473 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LGR5O75473 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LGR5O75473 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC16.09■□□□□ 0.17
LGR5O75473 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LGR5O75473 RN7SL725P-201ENST00000606439 259 ntBASIC16.09■□□□□ 0.17
LGR5O75473 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
LGR5O75473 AC242376.2-201ENST00000619355 883 ntBASIC16.09■□□□□ 0.17
LGR5O75473 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
LGR5O75473 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
LGR5O75473 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LGR5O75473 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
LGR5O75473 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LGR5O75473 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LGR5O75473 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.09■□□□□ 0.17
LGR5O75473 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LGR5O75473 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LGR5O75473 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LGR5O75473 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LGR5O75473 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.09■□□□□ 0.17
LGR5O75473 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
LGR5O75473 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
LGR5O75473 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LGR5O75473 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC16.08■□□□□ 0.17
LGR5O75473 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.08■□□□□ 0.17
LGR5O75473 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
LGR5O75473 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
LGR5O75473 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
LGR5O75473 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LGR5O75473 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
LGR5O75473 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC16.08■□□□□ 0.16
LGR5O75473 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LGR5O75473 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
LGR5O75473 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
LGR5O75473 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LGR5O75473 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LGR5O75473 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LGR5O75473 AL583805.1-201ENST00000391389 531 ntBASIC16.08■□□□□ 0.16
LGR5O75473 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC16.08■□□□□ 0.16
LGR5O75473 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
LGR5O75473 AP002803.1-201ENST00000528836 498 ntBASIC16.08■□□□□ 0.16
LGR5O75473 FOS-204ENST00000554617 796 ntTSL 2 BASIC16.08■□□□□ 0.16
LGR5O75473 KRT8P1-201ENST00000557533 1207 ntBASIC16.08■□□□□ 0.16
LGR5O75473 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC16.08■□□□□ 0.16
LGR5O75473 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC16.08■□□□□ 0.16
LGR5O75473 MIR6842-201ENST00000612539 65 ntBASIC16.08■□□□□ 0.16
LGR5O75473 WT1-AS_6.1-201ENST00000614919 121 ntBASIC16.08■□□□□ 0.16
LGR5O75473 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC16.08■□□□□ 0.16
LGR5O75473 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LGR5O75473 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
LGR5O75473 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LGR5O75473 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
LGR5O75473 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LGR5O75473 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.08■□□□□ 0.16
LGR5O75473 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
LGR5O75473 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
LGR5O75473 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
LGR5O75473 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
LGR5O75473 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms