Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.71□□□□□ -0.22
HCN1O60741 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HCN1O60741 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
HCN1O60741 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HCN1O60741 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
HCN1O60741 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
HCN1O60741 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
HCN1O60741 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
HCN1O60741 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.7□□□□□ -0.22
HCN1O60741 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HCN1O60741 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
HCN1O60741 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
HCN1O60741 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.7□□□□□ -0.22
HCN1O60741 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
HCN1O60741 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HCN1O60741 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HCN1O60741 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
HCN1O60741 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.7□□□□□ -0.22
HCN1O60741 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HCN1O60741 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.7□□□□□ -0.22
HCN1O60741 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HCN1O60741 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
HCN1O60741 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HCN1O60741 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
HCN1O60741 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HCN1O60741 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HCN1O60741 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HCN1O60741 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HCN1O60741 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
HCN1O60741 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
HCN1O60741 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
HCN1O60741 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HCN1O60741 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
HCN1O60741 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
HCN1O60741 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.7□□□□□ -0.22
HCN1O60741 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
HCN1O60741 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC13.7□□□□□ -0.22
HCN1O60741 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HCN1O60741 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC13.7□□□□□ -0.22
HCN1O60741 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC13.7□□□□□ -0.22
HCN1O60741 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HCN1O60741 HLA-K-203ENST00000430151 1046 ntBASIC13.7□□□□□ -0.22
HCN1O60741 OLR1-203ENST00000432556 950 ntTSL 2 BASIC13.7□□□□□ -0.22
HCN1O60741 FAM8A4P-201ENST00000435433 1213 ntBASIC13.7□□□□□ -0.22
HCN1O60741 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HCN1O60741 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC13.7□□□□□ -0.22
HCN1O60741 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC13.7□□□□□ -0.22
HCN1O60741 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC13.7□□□□□ -0.22
HCN1O60741 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC13.7□□□□□ -0.22
HCN1O60741 RIT1-205ENST00000539040 919 ntTSL 2 BASIC13.7□□□□□ -0.22
HCN1O60741 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC13.7□□□□□ -0.22
HCN1O60741 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC13.7□□□□□ -0.22
HCN1O60741 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC13.7□□□□□ -0.22
HCN1O60741 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
HCN1O60741 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC13.7□□□□□ -0.22
HCN1O60741 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HCN1O60741 ANKRD30BP2-201ENST00000435744 1610 ntBASIC13.7□□□□□ -0.22
HCN1O60741 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HCN1O60741 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HCN1O60741 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.7□□□□□ -0.22
HCN1O60741 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HCN1O60741 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HCN1O60741 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
HCN1O60741 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.7□□□□□ -0.22
HCN1O60741 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.7□□□□□ -0.22
HCN1O60741 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
HCN1O60741 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HCN1O60741 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HCN1O60741 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HCN1O60741 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.7□□□□□ -0.22
HCN1O60741 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HCN1O60741 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HCN1O60741 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HCN1O60741 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HCN1O60741 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.7□□□□□ -0.22
HCN1O60741 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.7□□□□□ -0.22
HCN1O60741 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
HCN1O60741 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HCN1O60741 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.69□□□□□ -0.22
HCN1O60741 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HCN1O60741 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.69□□□□□ -0.22
HCN1O60741 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
HCN1O60741 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
HCN1O60741 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HCN1O60741 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HCN1O60741 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
HCN1O60741 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
HCN1O60741 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HCN1O60741 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
HCN1O60741 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
HCN1O60741 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
HCN1O60741 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HCN1O60741 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
HCN1O60741 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.69□□□□□ -0.22
HCN1O60741 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HCN1O60741 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HCN1O60741 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.69□□□□□ -0.22
HCN1O60741 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.69□□□□□ -0.22
HCN1O60741 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HCN1O60741 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms