Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SSSCA1O60232 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC11.93□□□□□ -0.5
SSSCA1O60232 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC11.93□□□□□ -0.5
SSSCA1O60232 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC11.93□□□□□ -0.5
SSSCA1O60232 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SSSCA1O60232 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SSSCA1O60232 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
SSSCA1O60232 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SSSCA1O60232 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SSSCA1O60232 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SSSCA1O60232 TLE1P1-201ENST00000422965 589 ntBASIC11.93□□□□□ -0.5
SSSCA1O60232 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC11.93□□□□□ -0.5
SSSCA1O60232 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC11.93□□□□□ -0.5
SSSCA1O60232 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SSSCA1O60232 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SSSCA1O60232 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SSSCA1O60232 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC11.93□□□□□ -0.5
SSSCA1O60232 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC11.93□□□□□ -0.5
SSSCA1O60232 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC11.93□□□□□ -0.5
SSSCA1O60232 KRT126P-201ENST00000549467 1181 ntBASIC11.93□□□□□ -0.5
SSSCA1O60232 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SSSCA1O60232 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC11.93□□□□□ -0.5
SSSCA1O60232 AC004835.2-201ENST00000603762 682 ntBASIC11.93□□□□□ -0.5
SSSCA1O60232 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC11.93□□□□□ -0.5
SSSCA1O60232 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
SSSCA1O60232 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SSSCA1O60232 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SSSCA1O60232 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
SSSCA1O60232 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC11.93□□□□□ -0.5
SSSCA1O60232 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
SSSCA1O60232 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC11.93□□□□□ -0.5
SSSCA1O60232 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SSSCA1O60232 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SSSCA1O60232 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
SSSCA1O60232 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SSSCA1O60232 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SSSCA1O60232 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SSSCA1O60232 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
SSSCA1O60232 DRD5P1-201ENST00000456605 1438 ntBASIC11.93□□□□□ -0.5
SSSCA1O60232 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SSSCA1O60232 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
SSSCA1O60232 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SSSCA1O60232 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SSSCA1O60232 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC11.92□□□□□ -0.5
SSSCA1O60232 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC11.92□□□□□ -0.5
SSSCA1O60232 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
SSSCA1O60232 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SSSCA1O60232 HAL-202ENST00000538703 2637 ntTSL 2 BASIC11.92□□□□□ -0.5
SSSCA1O60232 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SSSCA1O60232 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SSSCA1O60232 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
SSSCA1O60232 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
SSSCA1O60232 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SSSCA1O60232 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SSSCA1O60232 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SSSCA1O60232 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
SSSCA1O60232 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SSSCA1O60232 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
SSSCA1O60232 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SSSCA1O60232 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC11.92□□□□□ -0.5
SSSCA1O60232 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
SSSCA1O60232 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SSSCA1O60232 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SSSCA1O60232 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SSSCA1O60232 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
SSSCA1O60232 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
SSSCA1O60232 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
SSSCA1O60232 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SSSCA1O60232 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SSSCA1O60232 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC11.92□□□□□ -0.5
SSSCA1O60232 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC11.92□□□□□ -0.5
SSSCA1O60232 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC11.92□□□□□ -0.5
SSSCA1O60232 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
SSSCA1O60232 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SSSCA1O60232 IMP4-203ENST00000409935 958 ntTSL 5 BASIC11.92□□□□□ -0.5
SSSCA1O60232 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC11.92□□□□□ -0.5
SSSCA1O60232 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
SSSCA1O60232 NUS1P3-201ENST00000423502 862 ntBASIC11.92□□□□□ -0.5
SSSCA1O60232 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
SSSCA1O60232 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC11.92□□□□□ -0.5
SSSCA1O60232 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC11.92□□□□□ -0.5
SSSCA1O60232 AC023141.5-201ENST00000458585 616 ntBASIC11.92□□□□□ -0.5
SSSCA1O60232 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC11.92□□□□□ -0.5
SSSCA1O60232 AC026434.2-201ENST00000506094 1078 ntBASIC11.92□□□□□ -0.5
SSSCA1O60232 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
SSSCA1O60232 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
SSSCA1O60232 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC11.92□□□□□ -0.5
SSSCA1O60232 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC11.92□□□□□ -0.5
SSSCA1O60232 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC11.92□□□□□ -0.5
SSSCA1O60232 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC11.92□□□□□ -0.5
SSSCA1O60232 AC005829.1-201ENST00000570002 483 ntBASIC11.92□□□□□ -0.5
SSSCA1O60232 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC11.92□□□□□ -0.5
SSSCA1O60232 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SSSCA1O60232 AL596442.2-201ENST00000610240 980 ntBASIC11.92□□□□□ -0.5
SSSCA1O60232 AP001059.3-201ENST00000619053 235 ntBASIC11.92□□□□□ -0.5
SSSCA1O60232 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
SSSCA1O60232 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
SSSCA1O60232 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SSSCA1O60232 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC11.92□□□□□ -0.5
SSSCA1O60232 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms