Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC11.78□□□□□ -0.52
TCRBV4S1A1TA0A5B7 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TCRBV4S1A1TA0A5B7 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC11.78□□□□□ -0.52
TCRBV4S1A1TA0A5B7 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC11.78□□□□□ -0.52
TCRBV4S1A1TA0A5B7 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC11.78□□□□□ -0.52
TCRBV4S1A1TA0A5B7 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TCRBV4S1A1TA0A5B7 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TCRBV4S1A1TA0A5B7 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TCRBV4S1A1TA0A5B7 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TCRBV4S1A1TA0A5B7 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TCRBV4S1A1TA0A5B7 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
TCRBV4S1A1TA0A5B7 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC11.78□□□□□ -0.52
TCRBV4S1A1TA0A5B7 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TCRBV4S1A1TA0A5B7 AC007969.1-201ENST00000433675 447 ntBASIC11.78□□□□□ -0.52
TCRBV4S1A1TA0A5B7 EIF3FP3-201ENST00000434851 1086 ntBASIC11.78□□□□□ -0.52
TCRBV4S1A1TA0A5B7 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC11.78□□□□□ -0.52
TCRBV4S1A1TA0A5B7 CNN2P10-201ENST00000443067 918 ntBASIC11.78□□□□□ -0.52
TCRBV4S1A1TA0A5B7 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
TCRBV4S1A1TA0A5B7 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC11.78□□□□□ -0.52
TCRBV4S1A1TA0A5B7 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC11.78□□□□□ -0.52
TCRBV4S1A1TA0A5B7 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TCRBV4S1A1TA0A5B7 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
TCRBV4S1A1TA0A5B7 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC11.78□□□□□ -0.52
TCRBV4S1A1TA0A5B7 AC104982.3-201ENST00000581995 514 ntBASIC11.78□□□□□ -0.52
TCRBV4S1A1TA0A5B7 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TCRBV4S1A1TA0A5B7 KLK3-211ENST00000597483 810 ntTSL 2 BASIC11.78□□□□□ -0.52
TCRBV4S1A1TA0A5B7 OR10B1P-201ENST00000601666 907 ntBASIC11.78□□□□□ -0.52
TCRBV4S1A1TA0A5B7 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TCRBV4S1A1TA0A5B7 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC11.78□□□□□ -0.52
TCRBV4S1A1TA0A5B7 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TCRBV4S1A1TA0A5B7 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TCRBV4S1A1TA0A5B7 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TCRBV4S1A1TA0A5B7 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC11.78□□□□□ -0.52
TCRBV4S1A1TA0A5B7 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC11.78□□□□□ -0.52
TCRBV4S1A1TA0A5B7 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC11.78□□□□□ -0.52
TCRBV4S1A1TA0A5B7 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
TCRBV4S1A1TA0A5B7 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TCRBV4S1A1TA0A5B7 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TCRBV4S1A1TA0A5B7 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TCRBV4S1A1TA0A5B7 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TCRBV4S1A1TA0A5B7 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC11.78□□□□□ -0.52
TCRBV4S1A1TA0A5B7 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
TCRBV4S1A1TA0A5B7 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
TCRBV4S1A1TA0A5B7 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
TCRBV4S1A1TA0A5B7 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
TCRBV4S1A1TA0A5B7 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC11.78□□□□□ -0.52
TCRBV4S1A1TA0A5B7 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC11.78□□□□□ -0.52
TCRBV4S1A1TA0A5B7 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TCRBV4S1A1TA0A5B7 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TCRBV4S1A1TA0A5B7 API5-203ENST00000455725 2257 ntTSL 2 BASIC11.77□□□□□ -0.52
TCRBV4S1A1TA0A5B7 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
TCRBV4S1A1TA0A5B7 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.52
TCRBV4S1A1TA0A5B7 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
TCRBV4S1A1TA0A5B7 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
TCRBV4S1A1TA0A5B7 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
TCRBV4S1A1TA0A5B7 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC11.77□□□□□ -0.52
TCRBV4S1A1TA0A5B7 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC11.77□□□□□ -0.52
TCRBV4S1A1TA0A5B7 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
TCRBV4S1A1TA0A5B7 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
TCRBV4S1A1TA0A5B7 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
TCRBV4S1A1TA0A5B7 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC11.77□□□□□ -0.52
TCRBV4S1A1TA0A5B7 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC11.77□□□□□ -0.52
TCRBV4S1A1TA0A5B7 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC11.77□□□□□ -0.52
TCRBV4S1A1TA0A5B7 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
TCRBV4S1A1TA0A5B7 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC11.77□□□□□ -0.53
TCRBV4S1A1TA0A5B7 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TCRBV4S1A1TA0A5B7 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC11.77□□□□□ -0.53
TCRBV4S1A1TA0A5B7 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
TCRBV4S1A1TA0A5B7 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TCRBV4S1A1TA0A5B7 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
TCRBV4S1A1TA0A5B7 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
TCRBV4S1A1TA0A5B7 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TCRBV4S1A1TA0A5B7 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TCRBV4S1A1TA0A5B7 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
TCRBV4S1A1TA0A5B7 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
TCRBV4S1A1TA0A5B7 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
TCRBV4S1A1TA0A5B7 BCYRN1-201ENST00000418539 200 ntBASIC11.77□□□□□ -0.53
TCRBV4S1A1TA0A5B7 AC006033.1-201ENST00000440505 426 ntBASIC11.77□□□□□ -0.53
TCRBV4S1A1TA0A5B7 KRT8P13-201ENST00000463294 1010 ntBASIC11.77□□□□□ -0.53
TCRBV4S1A1TA0A5B7 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC11.77□□□□□ -0.53
TCRBV4S1A1TA0A5B7 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
TCRBV4S1A1TA0A5B7 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC11.77□□□□□ -0.53
TCRBV4S1A1TA0A5B7 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC11.77□□□□□ -0.53
TCRBV4S1A1TA0A5B7 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC11.77□□□□□ -0.53
TCRBV4S1A1TA0A5B7 MIR3615-201ENST00000581999 87 ntBASIC11.77□□□□□ -0.53
TCRBV4S1A1TA0A5B7 RPS15-202ENST00000585665 467 ntTSL 3 BASIC11.77□□□□□ -0.53
TCRBV4S1A1TA0A5B7 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
TCRBV4S1A1TA0A5B7 CYGB-203ENST00000589145 788 ntTSL 3 BASIC11.77□□□□□ -0.53
TCRBV4S1A1TA0A5B7 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TCRBV4S1A1TA0A5B7 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC11.77□□□□□ -0.53
TCRBV4S1A1TA0A5B7 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
TCRBV4S1A1TA0A5B7 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TCRBV4S1A1TA0A5B7 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TCRBV4S1A1TA0A5B7 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
TCRBV4S1A1TA0A5B7 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC11.77□□□□□ -0.53
TCRBV4S1A1TA0A5B7 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
TCRBV4S1A1TA0A5B7 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC11.77□□□□□ -0.53
TCRBV4S1A1TA0A5B7 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC11.77□□□□□ -0.53
TCRBV4S1A1TA0A5B7 GRN-222ENST00000639447 1314 ntTSL 2 BASIC11.77□□□□□ -0.53
TCRBV4S1A1TA0A5B7 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms