Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTCH2Q9Y6C5 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
PTCH2Q9Y6C5 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.16■□□□□ 0.18
PTCH2Q9Y6C5 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
PTCH2Q9Y6C5 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PTCH2Q9Y6C5 ODCP-201ENST00000459650 1639 ntBASIC16.16■□□□□ 0.18
PTCH2Q9Y6C5 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PTCH2Q9Y6C5 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTCH2Q9Y6C5 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
PTCH2Q9Y6C5 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTCH2Q9Y6C5 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
PTCH2Q9Y6C5 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.16■□□□□ 0.18
PTCH2Q9Y6C5 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTCH2Q9Y6C5 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.16■□□□□ 0.18
PTCH2Q9Y6C5 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PTCH2Q9Y6C5 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTCH2Q9Y6C5 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTCH2Q9Y6C5 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTCH2Q9Y6C5 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PTCH2Q9Y6C5 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PTCH2Q9Y6C5 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
PTCH2Q9Y6C5 OR10N1P-201ENST00000392758 869 ntBASIC16.16■□□□□ 0.18
PTCH2Q9Y6C5 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PTCH2Q9Y6C5 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
PTCH2Q9Y6C5 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC16.16■□□□□ 0.18
PTCH2Q9Y6C5 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC16.16■□□□□ 0.18
PTCH2Q9Y6C5 PPP1R2P4-201ENST00000424051 595 ntBASIC16.16■□□□□ 0.18
PTCH2Q9Y6C5 IFNWP2-201ENST00000431203 580 ntBASIC16.16■□□□□ 0.18
PTCH2Q9Y6C5 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTCH2Q9Y6C5 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC16.16■□□□□ 0.18
PTCH2Q9Y6C5 RPS18P9-201ENST00000482817 460 ntBASIC16.16■□□□□ 0.18
PTCH2Q9Y6C5 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC16.16■□□□□ 0.18
PTCH2Q9Y6C5 RN7SKP155-201ENST00000516031 288 ntBASIC16.16■□□□□ 0.18
PTCH2Q9Y6C5 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC16.16■□□□□ 0.18
PTCH2Q9Y6C5 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC16.16■□□□□ 0.18
PTCH2Q9Y6C5 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC16.16■□□□□ 0.18
PTCH2Q9Y6C5 HNRNPA1P5-201ENST00000558213 966 ntBASIC16.16■□□□□ 0.18
PTCH2Q9Y6C5 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC16.16■□□□□ 0.18
PTCH2Q9Y6C5 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC16.16■□□□□ 0.18
PTCH2Q9Y6C5 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PTCH2Q9Y6C5 AC139713.2-207ENST00000641556 1292 ntBASIC16.16■□□□□ 0.18
PTCH2Q9Y6C5 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.16■□□□□ 0.18
PTCH2Q9Y6C5 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTCH2Q9Y6C5 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTCH2Q9Y6C5 AC023024.2-201ENST00000623561 1993 ntBASIC16.16■□□□□ 0.18
PTCH2Q9Y6C5 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTCH2Q9Y6C5 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTCH2Q9Y6C5 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.16■□□□□ 0.18
PTCH2Q9Y6C5 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PTCH2Q9Y6C5 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.16■□□□□ 0.18
PTCH2Q9Y6C5 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC16.16■□□□□ 0.18
PTCH2Q9Y6C5 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTCH2Q9Y6C5 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC16.16■□□□□ 0.18
PTCH2Q9Y6C5 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
PTCH2Q9Y6C5 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
PTCH2Q9Y6C5 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PTCH2Q9Y6C5 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PTCH2Q9Y6C5 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.16■□□□□ 0.18
PTCH2Q9Y6C5 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTCH2Q9Y6C5 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PTCH2Q9Y6C5 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC16.15■□□□□ 0.18
PTCH2Q9Y6C5 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC16.15■□□□□ 0.18
PTCH2Q9Y6C5 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTCH2Q9Y6C5 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTCH2Q9Y6C5 PPT1-215ENST00000641471 2368 ntBASIC16.15■□□□□ 0.18
PTCH2Q9Y6C5 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTCH2Q9Y6C5 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTCH2Q9Y6C5 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PTCH2Q9Y6C5 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC16.15■□□□□ 0.18
PTCH2Q9Y6C5 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
PTCH2Q9Y6C5 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTCH2Q9Y6C5 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC16.15■□□□□ 0.18
PTCH2Q9Y6C5 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC16.15■□□□□ 0.18
PTCH2Q9Y6C5 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC16.15■□□□□ 0.18
PTCH2Q9Y6C5 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PTCH2Q9Y6C5 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.15■□□□□ 0.18
PTCH2Q9Y6C5 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTCH2Q9Y6C5 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PTCH2Q9Y6C5 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTCH2Q9Y6C5 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTCH2Q9Y6C5 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PTCH2Q9Y6C5 PSAT1P2-201ENST00000426107 972 ntBASIC16.15■□□□□ 0.18
PTCH2Q9Y6C5 MROH4P-201ENST00000431302 1578 ntBASIC16.15■□□□□ 0.18
PTCH2Q9Y6C5 EEF1DP5-201ENST00000431410 772 ntBASIC16.15■□□□□ 0.18
PTCH2Q9Y6C5 AC002127.2-201ENST00000444032 792 ntTSL 3 BASIC16.15■□□□□ 0.18
PTCH2Q9Y6C5 SOD2-205ENST00000444946 917 ntTSL 2 BASIC16.15■□□□□ 0.18
PTCH2Q9Y6C5 Z82249.1-201ENST00000453866 568 ntTSL 4 BASIC16.15■□□□□ 0.18
PTCH2Q9Y6C5 RN7SL788P-201ENST00000460504 316 ntBASIC16.15■□□□□ 0.18
PTCH2Q9Y6C5 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PTCH2Q9Y6C5 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
PTCH2Q9Y6C5 AL132994.1-201ENST00000554098 400 ntBASIC16.15■□□□□ 0.18
PTCH2Q9Y6C5 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC16.15■□□□□ 0.18
PTCH2Q9Y6C5 MIR4254-201ENST00000581063 76 ntBASIC16.15■□□□□ 0.18
PTCH2Q9Y6C5 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC16.15■□□□□ 0.18
PTCH2Q9Y6C5 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
PTCH2Q9Y6C5 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC16.15■□□□□ 0.18
PTCH2Q9Y6C5 AC091769.1-201ENST00000619576 568 ntBASIC16.15■□□□□ 0.18
PTCH2Q9Y6C5 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC16.15■□□□□ 0.18
PTCH2Q9Y6C5 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.15■□□□□ 0.18
PTCH2Q9Y6C5 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms