Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLCF1Q9UBD9 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CLCF1Q9UBD9 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC12.94□□□□□ -0.34
CLCF1Q9UBD9 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
CLCF1Q9UBD9 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLCF1Q9UBD9 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC12.94□□□□□ -0.34
CLCF1Q9UBD9 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLCF1Q9UBD9 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLCF1Q9UBD9 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CLCF1Q9UBD9 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
CLCF1Q9UBD9 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLCF1Q9UBD9 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CLCF1Q9UBD9 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CLCF1Q9UBD9 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC12.94□□□□□ -0.34
CLCF1Q9UBD9 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC12.93□□□□□ -0.34
CLCF1Q9UBD9 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLCF1Q9UBD9 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
CLCF1Q9UBD9 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
CLCF1Q9UBD9 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC12.93□□□□□ -0.34
CLCF1Q9UBD9 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLCF1Q9UBD9 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC12.93□□□□□ -0.34
CLCF1Q9UBD9 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLCF1Q9UBD9 FRMPD2B-201ENST00000431305 1347 ntBASIC12.93□□□□□ -0.34
CLCF1Q9UBD9 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLCF1Q9UBD9 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC12.93□□□□□ -0.34
CLCF1Q9UBD9 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
CLCF1Q9UBD9 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLCF1Q9UBD9 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CLCF1Q9UBD9 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLCF1Q9UBD9 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLCF1Q9UBD9 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
CLCF1Q9UBD9 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
CLCF1Q9UBD9 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CLCF1Q9UBD9 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
CLCF1Q9UBD9 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC12.93□□□□□ -0.34
CLCF1Q9UBD9 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
CLCF1Q9UBD9 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CLCF1Q9UBD9 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLCF1Q9UBD9 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
CLCF1Q9UBD9 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC12.93□□□□□ -0.34
CLCF1Q9UBD9 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC12.93□□□□□ -0.34
CLCF1Q9UBD9 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC12.93□□□□□ -0.34
CLCF1Q9UBD9 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC12.93□□□□□ -0.34
CLCF1Q9UBD9 AC022447.6-201ENST00000515522 438 ntBASIC12.93□□□□□ -0.34
CLCF1Q9UBD9 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLCF1Q9UBD9 RTN3P1-201ENST00000536295 711 ntBASIC12.93□□□□□ -0.34
CLCF1Q9UBD9 SORD2P-201ENST00000558556 1069 ntBASIC12.93□□□□□ -0.34
CLCF1Q9UBD9 NAT9-211ENST00000580632 799 ntTSL 3 BASIC12.93□□□□□ -0.34
CLCF1Q9UBD9 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC12.93□□□□□ -0.34
CLCF1Q9UBD9 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLCF1Q9UBD9 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC12.93□□□□□ -0.34
CLCF1Q9UBD9 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLCF1Q9UBD9 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLCF1Q9UBD9 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CLCF1Q9UBD9 AGGF1P1-201ENST00000509500 2073 ntBASIC12.93□□□□□ -0.34
CLCF1Q9UBD9 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC12.93□□□□□ -0.34
CLCF1Q9UBD9 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC12.93□□□□□ -0.34
CLCF1Q9UBD9 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC12.93□□□□□ -0.34
CLCF1Q9UBD9 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CLCF1Q9UBD9 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLCF1Q9UBD9 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLCF1Q9UBD9 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLCF1Q9UBD9 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CLCF1Q9UBD9 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CLCF1Q9UBD9 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLCF1Q9UBD9 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLCF1Q9UBD9 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CLCF1Q9UBD9 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CLCF1Q9UBD9 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CLCF1Q9UBD9 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC12.92□□□□□ -0.34
CLCF1Q9UBD9 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
CLCF1Q9UBD9 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CLCF1Q9UBD9 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CLCF1Q9UBD9 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
CLCF1Q9UBD9 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CLCF1Q9UBD9 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CLCF1Q9UBD9 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC12.92□□□□□ -0.34
CLCF1Q9UBD9 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
CLCF1Q9UBD9 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CLCF1Q9UBD9 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CLCF1Q9UBD9 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CLCF1Q9UBD9 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CLCF1Q9UBD9 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC12.92□□□□□ -0.34
CLCF1Q9UBD9 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
CLCF1Q9UBD9 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC12.92□□□□□ -0.34
CLCF1Q9UBD9 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CLCF1Q9UBD9 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CLCF1Q9UBD9 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CLCF1Q9UBD9 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CLCF1Q9UBD9 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC12.92□□□□□ -0.34
CLCF1Q9UBD9 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC12.92□□□□□ -0.34
CLCF1Q9UBD9 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CLCF1Q9UBD9 AC234782.1-201ENST00000451950 919 ntBASIC12.92□□□□□ -0.34
CLCF1Q9UBD9 PFN2-206ENST00000461930 606 ntTSL 4 BASIC12.92□□□□□ -0.34
CLCF1Q9UBD9 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CLCF1Q9UBD9 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC12.92□□□□□ -0.34
CLCF1Q9UBD9 AC079328.1-201ENST00000560358 952 ntBASIC12.92□□□□□ -0.34
CLCF1Q9UBD9 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC12.92□□□□□ -0.34
CLCF1Q9UBD9 MIR3907-201ENST00000579424 151 ntBASIC12.92□□□□□ -0.34
CLCF1Q9UBD9 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms