Protein–RNA interactions for Protein: Q9P003

CNIH4, Protein cornichon homolog 4, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4Q9P003 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CNIH4Q9P003 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CNIH4Q9P003 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CNIH4Q9P003 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
CNIH4Q9P003 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC13.69□□□□□ -0.22
CNIH4Q9P003 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CNIH4Q9P003 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CNIH4Q9P003 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CNIH4Q9P003 MIR1908-201ENST00000410394 80 ntBASIC13.69□□□□□ -0.22
CNIH4Q9P003 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CNIH4Q9P003 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC13.69□□□□□ -0.22
CNIH4Q9P003 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CNIH4Q9P003 MTX1P1-201ENST00000440904 838 ntBASIC13.69□□□□□ -0.22
CNIH4Q9P003 CHMP1AP1-201ENST00000445563 662 ntBASIC13.69□□□□□ -0.22
CNIH4Q9P003 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC13.69□□□□□ -0.22
CNIH4Q9P003 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
CNIH4Q9P003 FAM86HP-204ENST00000513466 959 ntBASIC13.69□□□□□ -0.22
CNIH4Q9P003 AP003171.2-201ENST00000528208 925 ntBASIC13.69□□□□□ -0.22
CNIH4Q9P003 ACR-203ENST00000529621 708 ntTSL 5 BASIC13.69□□□□□ -0.22
CNIH4Q9P003 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CNIH4Q9P003 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC13.69□□□□□ -0.22
CNIH4Q9P003 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CNIH4Q9P003 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CNIH4Q9P003 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CNIH4Q9P003 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CNIH4Q9P003 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.69□□□□□ -0.22
CNIH4Q9P003 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.69□□□□□ -0.22
CNIH4Q9P003 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CNIH4Q9P003 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC13.69□□□□□ -0.22
CNIH4Q9P003 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
CNIH4Q9P003 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CNIH4Q9P003 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC13.69□□□□□ -0.22
CNIH4Q9P003 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.69□□□□□ -0.22
CNIH4Q9P003 AL023775.1-201ENST00000454907 1746 ntBASIC13.69□□□□□ -0.22
CNIH4Q9P003 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CNIH4Q9P003 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
CNIH4Q9P003 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CNIH4Q9P003 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CNIH4Q9P003 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.69□□□□□ -0.22
CNIH4Q9P003 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
CNIH4Q9P003 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CNIH4Q9P003 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CNIH4Q9P003 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CNIH4Q9P003 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.69□□□□□ -0.22
CNIH4Q9P003 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
CNIH4Q9P003 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CNIH4Q9P003 BEND3P1-201ENST00000421591 1944 ntBASIC13.68□□□□□ -0.22
CNIH4Q9P003 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
CNIH4Q9P003 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC13.68□□□□□ -0.22
CNIH4Q9P003 AC003102.2-201ENST00000589195 1469 ntBASIC13.68□□□□□ -0.22
CNIH4Q9P003 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CNIH4Q9P003 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CNIH4Q9P003 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CNIH4Q9P003 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CNIH4Q9P003 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.68□□□□□ -0.22
CNIH4Q9P003 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
CNIH4Q9P003 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CNIH4Q9P003 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CNIH4Q9P003 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC13.68□□□□□ -0.22
CNIH4Q9P003 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CNIH4Q9P003 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC13.68□□□□□ -0.22
CNIH4Q9P003 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CNIH4Q9P003 GOLGA2P4-201ENST00000441462 777 ntBASIC13.68□□□□□ -0.22
CNIH4Q9P003 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC13.68□□□□□ -0.22
CNIH4Q9P003 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CNIH4Q9P003 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC13.68□□□□□ -0.22
CNIH4Q9P003 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.68□□□□□ -0.22
CNIH4Q9P003 AGER-214ENST00000538695 487 ntTSL 2 BASIC13.68□□□□□ -0.22
CNIH4Q9P003 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC13.68□□□□□ -0.22
CNIH4Q9P003 AC091271.1-201ENST00000611877 1162 ntBASIC13.68□□□□□ -0.22
CNIH4Q9P003 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CNIH4Q9P003 AC002472.3-201ENST00000640124 621 ntBASIC13.68□□□□□ -0.22
CNIH4Q9P003 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
CNIH4Q9P003 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.68□□□□□ -0.22
CNIH4Q9P003 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.68□□□□□ -0.22
CNIH4Q9P003 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.68□□□□□ -0.22
CNIH4Q9P003 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CNIH4Q9P003 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.68□□□□□ -0.22
CNIH4Q9P003 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CNIH4Q9P003 AC011840.2-201ENST00000563063 1520 ntBASIC13.68□□□□□ -0.22
CNIH4Q9P003 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CNIH4Q9P003 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CNIH4Q9P003 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CNIH4Q9P003 AC012617.1-204ENST00000586340 2305 ntBASIC13.68□□□□□ -0.22
CNIH4Q9P003 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
CNIH4Q9P003 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CNIH4Q9P003 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CNIH4Q9P003 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CNIH4Q9P003 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CNIH4Q9P003 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CNIH4Q9P003 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CNIH4Q9P003 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CNIH4Q9P003 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CNIH4Q9P003 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
CNIH4Q9P003 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CNIH4Q9P003 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CNIH4Q9P003 MST1P2-201ENST00000457982 2291 ntBASIC13.67□□□□□ -0.22
CNIH4Q9P003 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CNIH4Q9P003 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
CNIH4Q9P003 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms