Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CBX8Q9HC52 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CBX8Q9HC52 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CBX8Q9HC52 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC16.29■□□□□ 0.2
CBX8Q9HC52 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CBX8Q9HC52 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.29■□□□□ 0.2
CBX8Q9HC52 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CBX8Q9HC52 AL161932.2-201ENST00000435436 679 ntBASIC16.29■□□□□ 0.2
CBX8Q9HC52 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CBX8Q9HC52 AC004890.2-204ENST00000481968 304 ntBASIC16.29■□□□□ 0.2
CBX8Q9HC52 AC067863.1-201ENST00000494933 530 ntBASIC16.29■□□□□ 0.2
CBX8Q9HC52 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.29■□□□□ 0.2
CBX8Q9HC52 IGHV3-42-201ENST00000520410 361 ntBASIC16.29■□□□□ 0.2
CBX8Q9HC52 AL359711.2-201ENST00000563105 872 ntBASIC16.29■□□□□ 0.2
CBX8Q9HC52 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.29■□□□□ 0.2
CBX8Q9HC52 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.29■□□□□ 0.2
CBX8Q9HC52 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.29■□□□□ 0.2
CBX8Q9HC52 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.29■□□□□ 0.2
CBX8Q9HC52 AP005019.2-201ENST00000615104 511 ntBASIC16.29■□□□□ 0.2
CBX8Q9HC52 AC139530.3-201ENST00000620344 690 ntBASIC16.29■□□□□ 0.2
CBX8Q9HC52 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CBX8Q9HC52 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CBX8Q9HC52 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CBX8Q9HC52 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CBX8Q9HC52 NME1-209ENST00000511355 1645 ntTSL 5 BASIC16.29■□□□□ 0.2
CBX8Q9HC52 C2-206ENST00000442278 2434 ntTSL 2 BASIC16.29■□□□□ 0.2
CBX8Q9HC52 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CBX8Q9HC52 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CBX8Q9HC52 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CBX8Q9HC52 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC16.29■□□□□ 0.2
CBX8Q9HC52 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CBX8Q9HC52 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CBX8Q9HC52 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CBX8Q9HC52 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CBX8Q9HC52 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC16.29■□□□□ 0.2
CBX8Q9HC52 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CBX8Q9HC52 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CBX8Q9HC52 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CBX8Q9HC52 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CBX8Q9HC52 AC125807.2-201ENST00000513358 3514 ntBASIC16.28■□□□□ 0.2
CBX8Q9HC52 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CBX8Q9HC52 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CBX8Q9HC52 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CBX8Q9HC52 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC16.28■□□□□ 0.2
CBX8Q9HC52 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CBX8Q9HC52 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CBX8Q9HC52 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
CBX8Q9HC52 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.28■□□□□ 0.2
CBX8Q9HC52 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CBX8Q9HC52 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
CBX8Q9HC52 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC16.28■□□□□ 0.2
CBX8Q9HC52 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.28■□□□□ 0.2
CBX8Q9HC52 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC16.28■□□□□ 0.2
CBX8Q9HC52 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.28■□□□□ 0.2
CBX8Q9HC52 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.28■□□□□ 0.2
CBX8Q9HC52 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.28■□□□□ 0.2
CBX8Q9HC52 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.28■□□□□ 0.2
CBX8Q9HC52 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.28■□□□□ 0.2
CBX8Q9HC52 AC008761.3-201ENST00000624803 892 ntBASIC16.28■□□□□ 0.2
CBX8Q9HC52 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CBX8Q9HC52 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CBX8Q9HC52 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CBX8Q9HC52 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CBX8Q9HC52 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CBX8Q9HC52 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CBX8Q9HC52 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC16.28■□□□□ 0.2
CBX8Q9HC52 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
CBX8Q9HC52 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
CBX8Q9HC52 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
CBX8Q9HC52 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CBX8Q9HC52 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC16.28■□□□□ 0.2
CBX8Q9HC52 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CBX8Q9HC52 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CBX8Q9HC52 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC16.28■□□□□ 0.2
CBX8Q9HC52 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CBX8Q9HC52 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CBX8Q9HC52 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CBX8Q9HC52 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CBX8Q9HC52 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CBX8Q9HC52 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CBX8Q9HC52 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC16.27■□□□□ 0.2
CBX8Q9HC52 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CBX8Q9HC52 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CBX8Q9HC52 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC16.27■□□□□ 0.2
CBX8Q9HC52 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CBX8Q9HC52 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CBX8Q9HC52 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC16.27■□□□□ 0.2
CBX8Q9HC52 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CBX8Q9HC52 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC16.27■□□□□ 0.2
CBX8Q9HC52 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CBX8Q9HC52 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CBX8Q9HC52 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CBX8Q9HC52 HAL-202ENST00000538703 2637 ntTSL 2 BASIC16.27■□□□□ 0.2
CBX8Q9HC52 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CBX8Q9HC52 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CBX8Q9HC52 AL118506.1-201ENST00000601296 3082 ntBASIC16.27■□□□□ 0.2
CBX8Q9HC52 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CBX8Q9HC52 SPDYE19P-201ENST00000338590 713 ntBASIC16.27■□□□□ 0.2
CBX8Q9HC52 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CBX8Q9HC52 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms