Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CNTNAP3Q9BZ76 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC13.88□□□□□ -0.19
CNTNAP3Q9BZ76 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CNTNAP3Q9BZ76 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CNTNAP3Q9BZ76 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CNTNAP3Q9BZ76 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC13.88□□□□□ -0.19
CNTNAP3Q9BZ76 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC13.88□□□□□ -0.19
CNTNAP3Q9BZ76 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC13.88□□□□□ -0.19
CNTNAP3Q9BZ76 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC13.88□□□□□ -0.19
CNTNAP3Q9BZ76 ABCC6P2-201ENST00000526069 590 ntBASIC13.88□□□□□ -0.19
CNTNAP3Q9BZ76 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.88□□□□□ -0.19
CNTNAP3Q9BZ76 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.88□□□□□ -0.19
CNTNAP3Q9BZ76 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC13.88□□□□□ -0.19
CNTNAP3Q9BZ76 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.88□□□□□ -0.19
CNTNAP3Q9BZ76 ACTBP9-201ENST00000587663 1099 ntBASIC13.88□□□□□ -0.19
CNTNAP3Q9BZ76 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC13.88□□□□□ -0.19
CNTNAP3Q9BZ76 UBA52-214ENST00000599595 692 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
CNTNAP3Q9BZ76 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.88□□□□□ -0.19
CNTNAP3Q9BZ76 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CNTNAP3Q9BZ76 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
CNTNAP3Q9BZ76 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC13.88□□□□□ -0.19
CNTNAP3Q9BZ76 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
CNTNAP3Q9BZ76 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CNTNAP3Q9BZ76 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CNTNAP3Q9BZ76 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CNTNAP3Q9BZ76 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CNTNAP3Q9BZ76 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CNTNAP3Q9BZ76 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC13.88□□□□□ -0.19
CNTNAP3Q9BZ76 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC13.88□□□□□ -0.19
CNTNAP3Q9BZ76 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CNTNAP3Q9BZ76 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CNTNAP3Q9BZ76 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CNTNAP3Q9BZ76 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CNTNAP3Q9BZ76 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
CNTNAP3Q9BZ76 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.88□□□□□ -0.19
CNTNAP3Q9BZ76 AC010491.1-201ENST00000563101 2797 ntBASIC13.88□□□□□ -0.19
CNTNAP3Q9BZ76 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC13.88□□□□□ -0.19
CNTNAP3Q9BZ76 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CNTNAP3Q9BZ76 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CNTNAP3Q9BZ76 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CNTNAP3Q9BZ76 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CNTNAP3Q9BZ76 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CNTNAP3Q9BZ76 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CNTNAP3Q9BZ76 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC13.87□□□□□ -0.19
CNTNAP3Q9BZ76 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
CNTNAP3Q9BZ76 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CNTNAP3Q9BZ76 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CNTNAP3Q9BZ76 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CNTNAP3Q9BZ76 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CNTNAP3Q9BZ76 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC13.87□□□□□ -0.19
CNTNAP3Q9BZ76 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC13.87□□□□□ -0.19
CNTNAP3Q9BZ76 ING5-213ENST00000636051 4199 ntTSL 5 BASIC13.87□□□□□ -0.19
CNTNAP3Q9BZ76 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CNTNAP3Q9BZ76 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CNTNAP3Q9BZ76 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CNTNAP3Q9BZ76 RNA5SP359-201ENST00000364838 113 ntBASIC13.87□□□□□ -0.19
CNTNAP3Q9BZ76 PMF1-203ENST00000368279 1019 ntTSL 2 BASIC13.87□□□□□ -0.19
CNTNAP3Q9BZ76 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CNTNAP3Q9BZ76 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
CNTNAP3Q9BZ76 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.87□□□□□ -0.19
CNTNAP3Q9BZ76 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC13.87□□□□□ -0.19
CNTNAP3Q9BZ76 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC13.87□□□□□ -0.19
CNTNAP3Q9BZ76 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC13.87□□□□□ -0.19
CNTNAP3Q9BZ76 AL353653.1-201ENST00000452336 638 ntTSL 2 BASIC13.87□□□□□ -0.19
CNTNAP3Q9BZ76 TPT1P6-201ENST00000458298 514 ntBASIC13.87□□□□□ -0.19
CNTNAP3Q9BZ76 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC13.87□□□□□ -0.19
CNTNAP3Q9BZ76 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC13.87□□□□□ -0.19
CNTNAP3Q9BZ76 AC006116.2-201ENST00000589958 988 ntBASIC13.87□□□□□ -0.19
CNTNAP3Q9BZ76 AC005786.2-201ENST00000592368 369 ntTSL 3 BASIC13.87□□□□□ -0.19
CNTNAP3Q9BZ76 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CNTNAP3Q9BZ76 ZNF671-203ENST00000596939 977 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CNTNAP3Q9BZ76 MIR6720-201ENST00000611664 98 ntBASIC13.87□□□□□ -0.19
CNTNAP3Q9BZ76 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CNTNAP3Q9BZ76 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC13.87□□□□□ -0.19
CNTNAP3Q9BZ76 AL499606.1-201ENST00000627866 413 ntTSL 3 BASIC13.87□□□□□ -0.19
CNTNAP3Q9BZ76 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC13.87□□□□□ -0.19
CNTNAP3Q9BZ76 AP000769.1-203ENST00000637245 208 ntBASIC13.87□□□□□ -0.19
CNTNAP3Q9BZ76 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CNTNAP3Q9BZ76 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CNTNAP3Q9BZ76 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CNTNAP3Q9BZ76 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CNTNAP3Q9BZ76 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.87□□□□□ -0.19
CNTNAP3Q9BZ76 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CNTNAP3Q9BZ76 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
CNTNAP3Q9BZ76 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CNTNAP3Q9BZ76 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC13.87□□□□□ -0.19
CNTNAP3Q9BZ76 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC13.87□□□□□ -0.19
CNTNAP3Q9BZ76 GNG4-201ENST00000366597 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CNTNAP3Q9BZ76 AC073347.1-201ENST00000421633 2643 ntBASIC13.87□□□□□ -0.19
CNTNAP3Q9BZ76 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
CNTNAP3Q9BZ76 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CNTNAP3Q9BZ76 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CNTNAP3Q9BZ76 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CNTNAP3Q9BZ76 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC13.87□□□□□ -0.19
CNTNAP3Q9BZ76 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC13.87□□□□□ -0.19
CNTNAP3Q9BZ76 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CNTNAP3Q9BZ76 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC13.86□□□□□ -0.19
CNTNAP3Q9BZ76 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CNTNAP3Q9BZ76 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CNTNAP3Q9BZ76 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms