Protein–RNA interactions for Protein: Q9BV40

VAMP8, Vesicle-associated membrane protein 8, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP8Q9BV40 SON-201ENST00000300278 7477 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
VAMP8Q9BV40 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
VAMP8Q9BV40 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
VAMP8Q9BV40 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
VAMP8Q9BV40 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
VAMP8Q9BV40 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC10.58□□□□□ -0.72
VAMP8Q9BV40 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC10.58□□□□□ -0.72
VAMP8Q9BV40 MAL2-202ENST00000531508 892 ntTSL 3 BASIC10.58□□□□□ -0.72
VAMP8Q9BV40 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
VAMP8Q9BV40 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC10.58□□□□□ -0.72
VAMP8Q9BV40 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC10.58□□□□□ -0.72
VAMP8Q9BV40 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC10.58□□□□□ -0.72
VAMP8Q9BV40 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC10.58□□□□□ -0.72
VAMP8Q9BV40 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC10.58□□□□□ -0.72
VAMP8Q9BV40 DDR1-238ENST00000446312 3202 ntTSL 5 BASIC10.58□□□□□ -0.72
VAMP8Q9BV40 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
VAMP8Q9BV40 GOSR2-233ENST00000640068 3103 ntTSL 5 BASIC10.58□□□□□ -0.72
VAMP8Q9BV40 YWHAB-201ENST00000353703 3049 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
VAMP8Q9BV40 C1QTNF6-201ENST00000337843 2934 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
VAMP8Q9BV40 CAGE1-201ENST00000296742 2821 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
VAMP8Q9BV40 SLC26A6-203ENST00000358747 2729 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
VAMP8Q9BV40 NFATC4-209ENST00000553879 2707 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
VAMP8Q9BV40 CCBE1-202ENST00000439986 6227 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
VAMP8Q9BV40 IGSF9-201ENST00000361509 3996 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
VAMP8Q9BV40 FER1L6-AS1-201ENST00000518567 2315 ntTSL 2 BASIC10.58□□□□□ -0.72
VAMP8Q9BV40 CCDC186-201ENST00000369285 2035 ntTSL 2 BASIC10.58□□□□□ -0.72
VAMP8Q9BV40 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
VAMP8Q9BV40 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC10.58□□□□□ -0.72
VAMP8Q9BV40 MSNP1-201ENST00000511640 1732 ntBASIC10.58□□□□□ -0.72
VAMP8Q9BV40 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC10.58□□□□□ -0.72
VAMP8Q9BV40 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC10.58□□□□□ -0.72
VAMP8Q9BV40 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
VAMP8Q9BV40 SLC6A7-201ENST00000230671 3739 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
VAMP8Q9BV40 AC093525.7-201ENST00000569852 3626 ntBASIC10.58□□□□□ -0.72
VAMP8Q9BV40 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
VAMP8Q9BV40 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
VAMP8Q9BV40 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
VAMP8Q9BV40 NPNT-202ENST00000379987 4598 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
VAMP8Q9BV40 DNAJC30-201ENST00000395176 2485 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
VAMP8Q9BV40 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
VAMP8Q9BV40 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
VAMP8Q9BV40 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
VAMP8Q9BV40 NOSTRIN-203ENST00000397209 1437 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
VAMP8Q9BV40 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC10.58□□□□□ -0.72
VAMP8Q9BV40 AMACR-201ENST00000335606 4153 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
VAMP8Q9BV40 HERC2P3-204ENST00000426501 5995 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
VAMP8Q9BV40 IDO2-204ENST00000502986 2294 ntTSL 5 BASIC10.58□□□□□ -0.72
VAMP8Q9BV40 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
VAMP8Q9BV40 TMEM220-201ENST00000341871 3106 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
VAMP8Q9BV40 TBC1D29-202ENST00000580161 3018 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
VAMP8Q9BV40 VWDE-206ENST00000614403 4701 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
VAMP8Q9BV40 CARF-213ENST00000438828 3574 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
VAMP8Q9BV40 LINC01164-201ENST00000341866 3384 ntTSL 2 BASIC10.57□□□□□ -0.72
VAMP8Q9BV40 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
VAMP8Q9BV40 ANKRD34B-201ENST00000338682 3938 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
VAMP8Q9BV40 PRPF40B-202ENST00000380281 3154 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
VAMP8Q9BV40 ABI1-212ENST00000490841 3188 ntTSL 2 BASIC10.57□□□□□ -0.72
VAMP8Q9BV40 TACC1-201ENST00000276520 6513 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
VAMP8Q9BV40 CADM3-AS1-201ENST00000415675 5044 ntTSL 2 BASIC10.57□□□□□ -0.72
VAMP8Q9BV40 AL138709.1-201ENST00000614840 1693 ntBASIC10.57□□□□□ -0.72
VAMP8Q9BV40 COL20A1-201ENST00000358894 4172 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
VAMP8Q9BV40 TSPEAR-203ENST00000613245 3524 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
VAMP8Q9BV40 FSCN3-201ENST00000265825 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
VAMP8Q9BV40 ULK4-201ENST00000301831 4613 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
VAMP8Q9BV40 POLR2J4-202ENST00000427076 6466 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
VAMP8Q9BV40 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC10.57□□□□□ -0.72
VAMP8Q9BV40 ZFAT-202ENST00000429442 4421 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
VAMP8Q9BV40 CC2D1A-208ENST00000589606 3117 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
VAMP8Q9BV40 FAM161A-203ENST00000405894 3684 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
VAMP8Q9BV40 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC10.57□□□□□ -0.72
VAMP8Q9BV40 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
VAMP8Q9BV40 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC10.57□□□□□ -0.72
VAMP8Q9BV40 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
VAMP8Q9BV40 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC10.57□□□□□ -0.72
VAMP8Q9BV40 IGSF11-202ENST00000393775 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
VAMP8Q9BV40 AC002350.2-201ENST00000623894 1828 ntBASIC10.57□□□□□ -0.72
VAMP8Q9BV40 ST3GAL6-228ENST00000613264 3399 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
VAMP8Q9BV40 SMCR5-201ENST00000543475 2844 ntBASIC10.57□□□□□ -0.72
VAMP8Q9BV40 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
VAMP8Q9BV40 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
VAMP8Q9BV40 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC10.57□□□□□ -0.72
VAMP8Q9BV40 HDLBP-203ENST00000391975 6372 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
VAMP8Q9BV40 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC10.57□□□□□ -0.72
VAMP8Q9BV40 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC10.57□□□□□ -0.72
VAMP8Q9BV40 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
VAMP8Q9BV40 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC10.57□□□□□ -0.72
VAMP8Q9BV40 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC10.57□□□□□ -0.72
VAMP8Q9BV40 HNRNPUP1-201ENST00000554987 333 ntBASIC10.57□□□□□ -0.72
VAMP8Q9BV40 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC10.57□□□□□ -0.72
VAMP8Q9BV40 GPX4-207ENST00000589115 812 ntTSL 2 BASIC10.57□□□□□ -0.72
VAMP8Q9BV40 AC097359.3-201ENST00000603982 1210 ntBASIC10.57□□□□□ -0.72
VAMP8Q9BV40 WT1-AS_3.1-201ENST00000613262 234 ntBASIC10.57□□□□□ -0.72
VAMP8Q9BV40 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC10.57□□□□□ -0.72
VAMP8Q9BV40 GGTLC5P-201ENST00000617623 998 ntBASIC10.57□□□□□ -0.72
VAMP8Q9BV40 AP000867.4-201ENST00000641616 219 ntBASIC10.57□□□□□ -0.72
VAMP8Q9BV40 ZNF555-203ENST00000591539 2270 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
VAMP8Q9BV40 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
VAMP8Q9BV40 WIPF3-201ENST00000242140 4184 ntAPPRIS P2 TSL 5 BASIC10.57□□□□□ -0.72
VAMP8Q9BV40 PDGFD-201ENST00000302251 4052 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
VAMP8Q9BV40 ARMC9-215ENST00000614261 4975 ntTSL 5 BASIC10.57□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms