Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NUP43Q8NFH3 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NUP43Q8NFH3 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
NUP43Q8NFH3 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NUP43Q8NFH3 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NUP43Q8NFH3 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.67□□□□□ -0.22
NUP43Q8NFH3 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NUP43Q8NFH3 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
NUP43Q8NFH3 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
NUP43Q8NFH3 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NUP43Q8NFH3 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
NUP43Q8NFH3 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
NUP43Q8NFH3 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NUP43Q8NFH3 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NUP43Q8NFH3 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NUP43Q8NFH3 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
NUP43Q8NFH3 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
NUP43Q8NFH3 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NUP43Q8NFH3 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NUP43Q8NFH3 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
NUP43Q8NFH3 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NUP43Q8NFH3 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NUP43Q8NFH3 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NUP43Q8NFH3 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NUP43Q8NFH3 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NUP43Q8NFH3 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NUP43Q8NFH3 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
NUP43Q8NFH3 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NUP43Q8NFH3 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.66□□□□□ -0.22
NUP43Q8NFH3 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.66□□□□□ -0.22
NUP43Q8NFH3 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
NUP43Q8NFH3 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC13.66□□□□□ -0.22
NUP43Q8NFH3 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NUP43Q8NFH3 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.66□□□□□ -0.22
NUP43Q8NFH3 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NUP43Q8NFH3 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NUP43Q8NFH3 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.66□□□□□ -0.22
NUP43Q8NFH3 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
NUP43Q8NFH3 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NUP43Q8NFH3 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NUP43Q8NFH3 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC13.66□□□□□ -0.22
NUP43Q8NFH3 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NUP43Q8NFH3 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC13.66□□□□□ -0.22
NUP43Q8NFH3 RBM7-207ENST00000544582 692 ntTSL 3 BASIC13.66□□□□□ -0.22
NUP43Q8NFH3 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NUP43Q8NFH3 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NUP43Q8NFH3 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC13.66□□□□□ -0.22
NUP43Q8NFH3 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.66□□□□□ -0.22
NUP43Q8NFH3 AC011474.4-201ENST00000623523 2076 ntBASIC13.66□□□□□ -0.22
NUP43Q8NFH3 AL359881.3-201ENST00000602640 1721 ntBASIC13.66□□□□□ -0.22
NUP43Q8NFH3 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NUP43Q8NFH3 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.66□□□□□ -0.22
NUP43Q8NFH3 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NUP43Q8NFH3 AC005840.4-201ENST00000541242 2494 ntBASIC13.66□□□□□ -0.22
NUP43Q8NFH3 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
NUP43Q8NFH3 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.66□□□□□ -0.22
NUP43Q8NFH3 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NUP43Q8NFH3 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NUP43Q8NFH3 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NUP43Q8NFH3 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NUP43Q8NFH3 AC064801.2-201ENST00000625052 1303 ntBASIC13.65□□□□□ -0.22
NUP43Q8NFH3 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NUP43Q8NFH3 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NUP43Q8NFH3 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.65□□□□□ -0.22
NUP43Q8NFH3 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
NUP43Q8NFH3 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.65□□□□□ -0.22
NUP43Q8NFH3 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NUP43Q8NFH3 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.65□□□□□ -0.22
NUP43Q8NFH3 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NUP43Q8NFH3 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NUP43Q8NFH3 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
NUP43Q8NFH3 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NUP43Q8NFH3 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
NUP43Q8NFH3 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC13.65□□□□□ -0.22
NUP43Q8NFH3 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
NUP43Q8NFH3 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NUP43Q8NFH3 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NUP43Q8NFH3 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC13.65□□□□□ -0.22
NUP43Q8NFH3 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NUP43Q8NFH3 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC13.65□□□□□ -0.22
NUP43Q8NFH3 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NUP43Q8NFH3 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NUP43Q8NFH3 AC104989.1-201ENST00000519711 778 ntBASIC13.65□□□□□ -0.22
NUP43Q8NFH3 IGHVIII-5-2-201ENST00000522505 261 ntBASIC13.65□□□□□ -0.22
NUP43Q8NFH3 NCK2-206ENST00000522586 490 ntTSL 5 BASIC13.65□□□□□ -0.22
NUP43Q8NFH3 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
NUP43Q8NFH3 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NUP43Q8NFH3 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC13.65□□□□□ -0.22
NUP43Q8NFH3 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC13.65□□□□□ -0.22
NUP43Q8NFH3 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC13.65□□□□□ -0.22
NUP43Q8NFH3 AC008687.7-202ENST00000637404 953 ntBASIC13.65□□□□□ -0.22
NUP43Q8NFH3 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NUP43Q8NFH3 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NUP43Q8NFH3 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NUP43Q8NFH3 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NUP43Q8NFH3 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC13.65□□□□□ -0.22
NUP43Q8NFH3 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
NUP43Q8NFH3 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NUP43Q8NFH3 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
NUP43Q8NFH3 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms