Protein–RNA interactions for Protein: Q8NBJ5

COLGALT1, Procollagen galactosyltransferase 1, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1Q8NBJ5 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
COLGALT1Q8NBJ5 AL390755.1-201ENST00000623716 2027 ntBASIC15.67■□□□□ 0.1
COLGALT1Q8NBJ5 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.67■□□□□ 0.1
COLGALT1Q8NBJ5 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.67■□□□□ 0.1
COLGALT1Q8NBJ5 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
COLGALT1Q8NBJ5 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.67■□□□□ 0.1
COLGALT1Q8NBJ5 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
COLGALT1Q8NBJ5 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
COLGALT1Q8NBJ5 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
COLGALT1Q8NBJ5 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
COLGALT1Q8NBJ5 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
COLGALT1Q8NBJ5 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
COLGALT1Q8NBJ5 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
COLGALT1Q8NBJ5 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
COLGALT1Q8NBJ5 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
COLGALT1Q8NBJ5 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.66■□□□□ 0.1
COLGALT1Q8NBJ5 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.66■□□□□ 0.1
COLGALT1Q8NBJ5 KRT8P28-201ENST00000433288 1390 ntBASIC15.66■□□□□ 0.1
COLGALT1Q8NBJ5 CICP14-201ENST00000629111 2732 ntBASIC15.66■□□□□ 0.1
COLGALT1Q8NBJ5 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
COLGALT1Q8NBJ5 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC15.66■□□□□ 0.1
COLGALT1Q8NBJ5 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC15.66■□□□□ 0.1
COLGALT1Q8NBJ5 AL627422.1-201ENST00000434104 580 ntBASIC15.66■□□□□ 0.1
COLGALT1Q8NBJ5 CHCHD2P9-201ENST00000461726 456 ntBASIC15.66■□□□□ 0.1
COLGALT1Q8NBJ5 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC15.66■□□□□ 0.1
COLGALT1Q8NBJ5 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
COLGALT1Q8NBJ5 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC15.66■□□□□ 0.1
COLGALT1Q8NBJ5 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
COLGALT1Q8NBJ5 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC15.66■□□□□ 0.1
COLGALT1Q8NBJ5 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC15.66■□□□□ 0.1
COLGALT1Q8NBJ5 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
COLGALT1Q8NBJ5 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
COLGALT1Q8NBJ5 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC15.66■□□□□ 0.1
COLGALT1Q8NBJ5 AC003686.1-201ENST00000550956 1034 ntBASIC15.66■□□□□ 0.1
COLGALT1Q8NBJ5 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC15.66■□□□□ 0.1
COLGALT1Q8NBJ5 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
COLGALT1Q8NBJ5 MIR4649-201ENST00000582839 64 ntBASIC15.66■□□□□ 0.1
COLGALT1Q8NBJ5 RPL17P45-201ENST00000586289 509 ntBASIC15.66■□□□□ 0.1
COLGALT1Q8NBJ5 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC15.66■□□□□ 0.1
COLGALT1Q8NBJ5 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
COLGALT1Q8NBJ5 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
COLGALT1Q8NBJ5 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
COLGALT1Q8NBJ5 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC15.66■□□□□ 0.1
COLGALT1Q8NBJ5 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC15.66■□□□□ 0.1
COLGALT1Q8NBJ5 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
COLGALT1Q8NBJ5 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
COLGALT1Q8NBJ5 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
COLGALT1Q8NBJ5 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
COLGALT1Q8NBJ5 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
COLGALT1Q8NBJ5 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
COLGALT1Q8NBJ5 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
COLGALT1Q8NBJ5 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
COLGALT1Q8NBJ5 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
COLGALT1Q8NBJ5 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
COLGALT1Q8NBJ5 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
COLGALT1Q8NBJ5 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
COLGALT1Q8NBJ5 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
COLGALT1Q8NBJ5 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
COLGALT1Q8NBJ5 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
COLGALT1Q8NBJ5 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.65■□□□□ 0.1
COLGALT1Q8NBJ5 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
COLGALT1Q8NBJ5 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COLGALT1Q8NBJ5 API5-203ENST00000455725 2257 ntTSL 2 BASIC15.65■□□□□ 0.1
COLGALT1Q8NBJ5 FAM45BP-202ENST00000592932 1624 ntBASIC15.65■□□□□ 0.1
COLGALT1Q8NBJ5 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
COLGALT1Q8NBJ5 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COLGALT1Q8NBJ5 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
COLGALT1Q8NBJ5 AL136172.1-201ENST00000598590 1394 ntBASIC15.65■□□□□ 0.1
COLGALT1Q8NBJ5 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COLGALT1Q8NBJ5 MIR600HG-201ENST00000449175 5984 ntBASIC15.65■□□□□ 0.1
COLGALT1Q8NBJ5 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
COLGALT1Q8NBJ5 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.65■□□□□ 0.1
COLGALT1Q8NBJ5 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.65■□□□□ 0.1
COLGALT1Q8NBJ5 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COLGALT1Q8NBJ5 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COLGALT1Q8NBJ5 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
COLGALT1Q8NBJ5 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.65■□□□□ 0.1
COLGALT1Q8NBJ5 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COLGALT1Q8NBJ5 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COLGALT1Q8NBJ5 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
COLGALT1Q8NBJ5 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.65■□□□□ 0.1
COLGALT1Q8NBJ5 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC15.65■□□□□ 0.1
COLGALT1Q8NBJ5 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
COLGALT1Q8NBJ5 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC15.65■□□□□ 0.1
COLGALT1Q8NBJ5 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
COLGALT1Q8NBJ5 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
COLGALT1Q8NBJ5 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COLGALT1Q8NBJ5 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
COLGALT1Q8NBJ5 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC15.65■□□□□ 0.1
COLGALT1Q8NBJ5 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC15.65■□□□□ 0.1
COLGALT1Q8NBJ5 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC15.65■□□□□ 0.1
COLGALT1Q8NBJ5 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC15.65■□□□□ 0.1
COLGALT1Q8NBJ5 AC007326.1-201ENST00000604539 458 ntBASIC15.65■□□□□ 0.1
COLGALT1Q8NBJ5 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COLGALT1Q8NBJ5 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
COLGALT1Q8NBJ5 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COLGALT1Q8NBJ5 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COLGALT1Q8NBJ5 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
COLGALT1Q8NBJ5 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC15.65■□□□□ 0.1
COLGALT1Q8NBJ5 KRT8P31-201ENST00000504812 1408 ntBASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms