Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN22Q8N7P3 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CLDN22Q8N7P3 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN22Q8N7P3 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC13.32□□□□□ -0.28
CLDN22Q8N7P3 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
CLDN22Q8N7P3 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
CLDN22Q8N7P3 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC13.32□□□□□ -0.28
CLDN22Q8N7P3 AC020910.5-201ENST00000623668 1865 ntBASIC13.32□□□□□ -0.28
CLDN22Q8N7P3 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
CLDN22Q8N7P3 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN22Q8N7P3 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN22Q8N7P3 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN22Q8N7P3 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN22Q8N7P3 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN22Q8N7P3 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN22Q8N7P3 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC13.32□□□□□ -0.28
CLDN22Q8N7P3 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CLDN22Q8N7P3 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.32□□□□□ -0.28
CLDN22Q8N7P3 HMGN1P19-201ENST00000436976 333 ntBASIC13.32□□□□□ -0.28
CLDN22Q8N7P3 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC13.32□□□□□ -0.28
CLDN22Q8N7P3 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
CLDN22Q8N7P3 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC13.32□□□□□ -0.28
CLDN22Q8N7P3 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC13.32□□□□□ -0.28
CLDN22Q8N7P3 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC13.32□□□□□ -0.28
CLDN22Q8N7P3 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN22Q8N7P3 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC13.32□□□□□ -0.28
CLDN22Q8N7P3 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN22Q8N7P3 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN22Q8N7P3 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN22Q8N7P3 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN22Q8N7P3 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN22Q8N7P3 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CLDN22Q8N7P3 AC068760.1-201ENST00000493579 1953 ntBASIC13.32□□□□□ -0.28
CLDN22Q8N7P3 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN22Q8N7P3 AC064801.2-201ENST00000625052 1303 ntBASIC13.32□□□□□ -0.28
CLDN22Q8N7P3 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
CLDN22Q8N7P3 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN22Q8N7P3 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN22Q8N7P3 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN22Q8N7P3 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC13.32□□□□□ -0.28
CLDN22Q8N7P3 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC13.32□□□□□ -0.28
CLDN22Q8N7P3 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN22Q8N7P3 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN22Q8N7P3 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.32□□□□□ -0.28
CLDN22Q8N7P3 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN22Q8N7P3 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN22Q8N7P3 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CLDN22Q8N7P3 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN22Q8N7P3 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN22Q8N7P3 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.31□□□□□ -0.28
CLDN22Q8N7P3 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN22Q8N7P3 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN22Q8N7P3 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.31□□□□□ -0.28
CLDN22Q8N7P3 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN22Q8N7P3 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN22Q8N7P3 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN22Q8N7P3 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.31□□□□□ -0.28
CLDN22Q8N7P3 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
CLDN22Q8N7P3 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN22Q8N7P3 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN22Q8N7P3 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC13.31□□□□□ -0.28
CLDN22Q8N7P3 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN22Q8N7P3 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN22Q8N7P3 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN22Q8N7P3 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CLDN22Q8N7P3 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN22Q8N7P3 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN22Q8N7P3 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN22Q8N7P3 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.31□□□□□ -0.28
CLDN22Q8N7P3 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN22Q8N7P3 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC13.31□□□□□ -0.28
CLDN22Q8N7P3 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN22Q8N7P3 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN22Q8N7P3 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.31□□□□□ -0.28
CLDN22Q8N7P3 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN22Q8N7P3 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN22Q8N7P3 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC13.31□□□□□ -0.28
CLDN22Q8N7P3 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN22Q8N7P3 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
CLDN22Q8N7P3 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN22Q8N7P3 FAM90A12P-201ENST00000519497 2375 ntBASIC13.31□□□□□ -0.28
CLDN22Q8N7P3 FAM90A24P-201ENST00000520792 2369 ntBASIC13.31□□□□□ -0.28
CLDN22Q8N7P3 AC083964.2-201ENST00000623988 2396 ntBASIC13.31□□□□□ -0.28
CLDN22Q8N7P3 CLUHP2-201ENST00000426660 1303 ntBASIC13.31□□□□□ -0.28
CLDN22Q8N7P3 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN22Q8N7P3 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN22Q8N7P3 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN22Q8N7P3 AC004241.5-201ENST00000623870 2448 ntBASIC13.31□□□□□ -0.28
CLDN22Q8N7P3 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
CLDN22Q8N7P3 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN22Q8N7P3 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC13.31□□□□□ -0.28
CLDN22Q8N7P3 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN22Q8N7P3 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC13.31□□□□□ -0.28
CLDN22Q8N7P3 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN22Q8N7P3 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN22Q8N7P3 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN22Q8N7P3 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC13.31□□□□□ -0.28
CLDN22Q8N7P3 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
CLDN22Q8N7P3 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CLDN22Q8N7P3 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms