Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 AC140878.1-201ENST00000565277 250 ntBASIC11.67□□□□□ -0.54
FAM78BQ5VT40 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
FAM78BQ5VT40 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
FAM78BQ5VT40 AC073592.8-201ENST00000624126 511 ntBASIC11.67□□□□□ -0.54
FAM78BQ5VT40 AC004461.2-201ENST00000629517 803 ntBASIC11.67□□□□□ -0.54
FAM78BQ5VT40 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
FAM78BQ5VT40 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
FAM78BQ5VT40 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
FAM78BQ5VT40 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
FAM78BQ5VT40 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
FAM78BQ5VT40 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
FAM78BQ5VT40 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
FAM78BQ5VT40 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
FAM78BQ5VT40 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC11.67□□□□□ -0.54
FAM78BQ5VT40 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC11.67□□□□□ -0.54
FAM78BQ5VT40 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
FAM78BQ5VT40 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
FAM78BQ5VT40 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
FAM78BQ5VT40 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
FAM78BQ5VT40 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
FAM78BQ5VT40 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
FAM78BQ5VT40 PCDHB18P-202ENST00000526308 3197 ntBASIC11.67□□□□□ -0.54
FAM78BQ5VT40 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC11.67□□□□□ -0.54
FAM78BQ5VT40 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
FAM78BQ5VT40 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC11.67□□□□□ -0.54
FAM78BQ5VT40 RN7SL832P-201ENST00000607781 1756 ntBASIC11.67□□□□□ -0.54
FAM78BQ5VT40 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
FAM78BQ5VT40 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC11.67□□□□□ -0.54
FAM78BQ5VT40 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC11.67□□□□□ -0.54
FAM78BQ5VT40 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
FAM78BQ5VT40 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC11.66□□□□□ -0.54
FAM78BQ5VT40 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
FAM78BQ5VT40 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
FAM78BQ5VT40 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC11.66□□□□□ -0.54
FAM78BQ5VT40 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC11.66□□□□□ -0.54
FAM78BQ5VT40 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
FAM78BQ5VT40 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
FAM78BQ5VT40 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC11.66□□□□□ -0.54
FAM78BQ5VT40 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC11.66□□□□□ -0.54
FAM78BQ5VT40 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC11.66□□□□□ -0.54
FAM78BQ5VT40 KRT18P28-201ENST00000453838 1332 ntBASIC11.66□□□□□ -0.54
FAM78BQ5VT40 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
FAM78BQ5VT40 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
FAM78BQ5VT40 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC11.66□□□□□ -0.54
FAM78BQ5VT40 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
FAM78BQ5VT40 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
FAM78BQ5VT40 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
FAM78BQ5VT40 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
FAM78BQ5VT40 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC11.66□□□□□ -0.54
FAM78BQ5VT40 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
FAM78BQ5VT40 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
FAM78BQ5VT40 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
FAM78BQ5VT40 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
FAM78BQ5VT40 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
FAM78BQ5VT40 HLA-K-203ENST00000430151 1046 ntBASIC11.66□□□□□ -0.54
FAM78BQ5VT40 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC11.66□□□□□ -0.54
FAM78BQ5VT40 METTL21AP1-201ENST00000438852 635 ntBASIC11.66□□□□□ -0.54
FAM78BQ5VT40 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC11.66□□□□□ -0.54
FAM78BQ5VT40 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC11.66□□□□□ -0.54
FAM78BQ5VT40 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC11.66□□□□□ -0.54
FAM78BQ5VT40 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC11.66□□□□□ -0.54
FAM78BQ5VT40 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC11.66□□□□□ -0.54
FAM78BQ5VT40 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC11.66□□□□□ -0.54
FAM78BQ5VT40 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC11.66□□□□□ -0.54
FAM78BQ5VT40 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
FAM78BQ5VT40 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC11.66□□□□□ -0.54
FAM78BQ5VT40 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
FAM78BQ5VT40 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC11.66□□□□□ -0.54
FAM78BQ5VT40 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC11.66□□□□□ -0.54
FAM78BQ5VT40 TEX28P1-201ENST00000613479 1221 ntBASIC11.66□□□□□ -0.54
FAM78BQ5VT40 TEX28P2-201ENST00000617764 1221 ntBASIC11.66□□□□□ -0.54
FAM78BQ5VT40 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC11.66□□□□□ -0.54
FAM78BQ5VT40 AL109936.8-201ENST00000641772 604 ntBASIC11.66□□□□□ -0.54
FAM78BQ5VT40 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
FAM78BQ5VT40 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
FAM78BQ5VT40 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
FAM78BQ5VT40 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
FAM78BQ5VT40 AL158070.2-201ENST00000623713 1621 ntBASIC11.66□□□□□ -0.54
FAM78BQ5VT40 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
FAM78BQ5VT40 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC11.66□□□□□ -0.54
FAM78BQ5VT40 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC11.66□□□□□ -0.54
FAM78BQ5VT40 AL365181.3-201ENST00000605886 3222 ntBASIC11.66□□□□□ -0.54
FAM78BQ5VT40 OS9-206ENST00000435406 2346 ntTSL 2 BASIC11.66□□□□□ -0.54
FAM78BQ5VT40 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
FAM78BQ5VT40 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
FAM78BQ5VT40 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
FAM78BQ5VT40 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
FAM78BQ5VT40 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
FAM78BQ5VT40 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC11.66□□□□□ -0.54
FAM78BQ5VT40 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
FAM78BQ5VT40 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
FAM78BQ5VT40 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC11.66□□□□□ -0.54
FAM78BQ5VT40 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
FAM78BQ5VT40 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC11.66□□□□□ -0.54
FAM78BQ5VT40 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
FAM78BQ5VT40 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC11.66□□□□□ -0.54
FAM78BQ5VT40 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
FAM78BQ5VT40 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC11.66□□□□□ -0.54
FAM78BQ5VT40 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
FAM78BQ5VT40 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms