Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 ARL16-210ENST00000574938 751 ntTSL 2 BASIC19.93■□□□□ 0.78
CDCA8Q53HL2 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC19.93■□□□□ 0.78
CDCA8Q53HL2 AL109837.1-201ENST00000603272 613 ntBASIC19.93■□□□□ 0.78
CDCA8Q53HL2 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC19.93■□□□□ 0.78
CDCA8Q53HL2 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC19.93■□□□□ 0.78
CDCA8Q53HL2 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDCA8Q53HL2 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC19.93■□□□□ 0.78
CDCA8Q53HL2 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDCA8Q53HL2 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDCA8Q53HL2 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDCA8Q53HL2 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
CDCA8Q53HL2 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDCA8Q53HL2 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CDCA8Q53HL2 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDCA8Q53HL2 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDCA8Q53HL2 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDCA8Q53HL2 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDCA8Q53HL2 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC19.93■□□□□ 0.78
CDCA8Q53HL2 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC19.93■□□□□ 0.78
CDCA8Q53HL2 AC007952.5-201ENST00000572818 1486 ntBASIC19.92■□□□□ 0.78
CDCA8Q53HL2 AC020910.6-201ENST00000623084 1459 ntBASIC19.92■□□□□ 0.78
CDCA8Q53HL2 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
CDCA8Q53HL2 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDCA8Q53HL2 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDCA8Q53HL2 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CDCA8Q53HL2 COCH-203ENST00000460581 2688 ntTSL 2 BASIC19.92■□□□□ 0.78
CDCA8Q53HL2 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC19.92■□□□□ 0.78
CDCA8Q53HL2 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CDCA8Q53HL2 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDCA8Q53HL2 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDCA8Q53HL2 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDCA8Q53HL2 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC19.92■□□□□ 0.78
CDCA8Q53HL2 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC19.92■□□□□ 0.78
CDCA8Q53HL2 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDCA8Q53HL2 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDCA8Q53HL2 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
CDCA8Q53HL2 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
CDCA8Q53HL2 USP17L6P-201ENST00000382470 1197 ntBASIC19.92■□□□□ 0.78
CDCA8Q53HL2 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC19.92■□□□□ 0.78
CDCA8Q53HL2 PARVG-202ENST00000415224 999 ntTSL 2 BASIC19.92■□□□□ 0.78
CDCA8Q53HL2 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC19.92■□□□□ 0.78
CDCA8Q53HL2 RPSAP15-201ENST00000448168 861 ntBASIC19.92■□□□□ 0.78
CDCA8Q53HL2 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC19.92■□□□□ 0.78
CDCA8Q53HL2 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC19.92■□□□□ 0.78
CDCA8Q53HL2 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDCA8Q53HL2 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
CDCA8Q53HL2 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC19.92■□□□□ 0.78
CDCA8Q53HL2 AC012044.1-201ENST00000603431 297 ntBASIC19.92■□□□□ 0.78
CDCA8Q53HL2 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC19.92■□□□□ 0.78
CDCA8Q53HL2 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDCA8Q53HL2 AC068587.10-201ENST00000641210 219 ntBASIC19.92■□□□□ 0.78
CDCA8Q53HL2 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDCA8Q53HL2 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
CDCA8Q53HL2 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC19.92■□□□□ 0.78
CDCA8Q53HL2 KRT18P9-201ENST00000604826 1300 ntBASIC19.92■□□□□ 0.78
CDCA8Q53HL2 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDCA8Q53HL2 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDCA8Q53HL2 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC19.92■□□□□ 0.78
CDCA8Q53HL2 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CDCA8Q53HL2 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDCA8Q53HL2 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
CDCA8Q53HL2 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC19.92■□□□□ 0.78
CDCA8Q53HL2 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC19.92■□□□□ 0.78
CDCA8Q53HL2 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CDCA8Q53HL2 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CDCA8Q53HL2 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CDCA8Q53HL2 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC19.91■□□□□ 0.78
CDCA8Q53HL2 AC007686.3-201ENST00000619017 3487 ntBASIC19.91■□□□□ 0.78
CDCA8Q53HL2 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDCA8Q53HL2 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDCA8Q53HL2 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC19.91■□□□□ 0.78
CDCA8Q53HL2 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDCA8Q53HL2 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC19.91■□□□□ 0.78
CDCA8Q53HL2 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDCA8Q53HL2 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC19.91■□□□□ 0.78
CDCA8Q53HL2 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CDCA8Q53HL2 RPS9P1-201ENST00000419943 583 ntBASIC19.91■□□□□ 0.78
CDCA8Q53HL2 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC19.91■□□□□ 0.78
CDCA8Q53HL2 AC234782.1-201ENST00000451950 919 ntBASIC19.91■□□□□ 0.78
CDCA8Q53HL2 KRT18P15-201ENST00000458108 1291 ntBASIC19.91■□□□□ 0.78
CDCA8Q53HL2 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC19.91■□□□□ 0.78
CDCA8Q53HL2 AC114947.1-202ENST00000514136 344 ntBASIC19.91■□□□□ 0.78
CDCA8Q53HL2 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CDCA8Q53HL2 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
CDCA8Q53HL2 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC19.91■□□□□ 0.78
CDCA8Q53HL2 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC19.91■□□□□ 0.78
CDCA8Q53HL2 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDCA8Q53HL2 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDCA8Q53HL2 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CDCA8Q53HL2 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDCA8Q53HL2 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDCA8Q53HL2 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC19.91■□□□□ 0.78
CDCA8Q53HL2 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDCA8Q53HL2 AL596257.1-201ENST00000641463 2694 ntBASIC19.91■□□□□ 0.78
CDCA8Q53HL2 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC19.91■□□□□ 0.78
CDCA8Q53HL2 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CDCA8Q53HL2 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDCA8Q53HL2 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CDCA8Q53HL2 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDCA8Q53HL2 KRT8P31-201ENST00000504812 1408 ntBASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms