Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 MED16-204ENST00000395808 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
LINC01554Q52M75 KCNAB1-215ENST00000618897 4437 ntTSL 5 BASIC7.41□□□□□ -1.22
LINC01554Q52M75 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
LINC01554Q52M75 TMEM164-201ENST00000288381 5452 ntTSL 5 BASIC7.41□□□□□ -1.22
LINC01554Q52M75 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC7.41□□□□□ -1.22
LINC01554Q52M75 FAM230B-208ENST00000451257 3566 ntTSL 5 BASIC7.41□□□□□ -1.22
LINC01554Q52M75 PIK3C2B-202ENST00000367187 7686 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
LINC01554Q52M75 JAK3-207ENST00000534444 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
LINC01554Q52M75 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
LINC01554Q52M75 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
LINC01554Q52M75 ARID4A-206ENST00000431317 5783 ntTSL 5 BASIC7.41□□□□□ -1.22
LINC01554Q52M75 PRLR-211ENST00000511486 1566 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
LINC01554Q52M75 PCMTD1-208ENST00000544451 3697 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
LINC01554Q52M75 HDAC5-204ENST00000586802 3662 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
LINC01554Q52M75 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC7.41□□□□□ -1.22
LINC01554Q52M75 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
LINC01554Q52M75 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
LINC01554Q52M75 RNF13-201ENST00000344229 2866 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
LINC01554Q52M75 PCDHGA1-201ENST00000378105 4069 ntAPPRIS ALT2 BASIC7.41□□□□□ -1.22
LINC01554Q52M75 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
LINC01554Q52M75 CUL9-201ENST00000252050 7780 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
LINC01554Q52M75 LRG1-201ENST00000306390 3036 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
LINC01554Q52M75 TESK2-202ENST00000372086 3074 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
LINC01554Q52M75 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC7.41□□□□□ -1.22
LINC01554Q52M75 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
LINC01554Q52M75 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC7.4□□□□□ -1.22
LINC01554Q52M75 NRP1-206ENST00000374867 5877 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
LINC01554Q52M75 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
LINC01554Q52M75 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
LINC01554Q52M75 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC7.4□□□□□ -1.22
LINC01554Q52M75 PI4KAP2-201ENST00000360806 2080 ntBASIC7.4□□□□□ -1.22
LINC01554Q52M75 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
LINC01554Q52M75 TAF1C-203ENST00000541676 3502 ntAPPRIS ALT2 TSL 2 BASIC7.4□□□□□ -1.22
LINC01554Q52M75 SPECC1-205ENST00000395529 4971 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
LINC01554Q52M75 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
LINC01554Q52M75 BCL2L11-206ENST00000393256 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
LINC01554Q52M75 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
LINC01554Q52M75 RHOH-221ENST00000615577 2227 ntAPPRIS P1 TSL 3 BASIC7.4□□□□□ -1.22
LINC01554Q52M75 RHOH-223ENST00000619474 2230 ntAPPRIS P1 TSL 4 BASIC7.4□□□□□ -1.22
LINC01554Q52M75 B3GAT2-202ENST00000615536 5206 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
LINC01554Q52M75 XPC-201ENST00000285021 3832 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
LINC01554Q52M75 ZSCAN20-202ENST00000373413 2367 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
LINC01554Q52M75 EXOC5-211ENST00000621441 10589 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
LINC01554Q52M75 TTC30A-201ENST00000355689 5975 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
LINC01554Q52M75 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
LINC01554Q52M75 SMCR5-201ENST00000543475 2844 ntBASIC7.4□□□□□ -1.22
LINC01554Q52M75 TNKS-213ENST00000522110 2900 ntBASIC7.4□□□□□ -1.22
LINC01554Q52M75 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC7.4□□□□□ -1.22
LINC01554Q52M75 STK26-201ENST00000354719 3179 ntTSL 2 BASIC7.4□□□□□ -1.22
LINC01554Q52M75 EFR3B-204ENST00000403714 7434 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
LINC01554Q52M75 ARHGEF1-203ENST00000354532 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
LINC01554Q52M75 CWC25-202ENST00000614790 3234 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
LINC01554Q52M75 AC010422.6-201ENST00000593682 5857 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
LINC01554Q52M75 LRRC8E-201ENST00000306708 3595 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
LINC01554Q52M75 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC7.4□□□□□ -1.22
LINC01554Q52M75 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
LINC01554Q52M75 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
LINC01554Q52M75 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
LINC01554Q52M75 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC7.4□□□□□ -1.22
LINC01554Q52M75 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC7.4□□□□□ -1.22
LINC01554Q52M75 DPM2-202ENST00000373110 738 ntTSL 2 BASIC7.4□□□□□ -1.22
LINC01554Q52M75 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
LINC01554Q52M75 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
LINC01554Q52M75 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
LINC01554Q52M75 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.22
LINC01554Q52M75 PTCHD3P3-201ENST00000403073 906 ntBASIC7.4□□□□□ -1.22
LINC01554Q52M75 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.22
LINC01554Q52M75 PMS2P1-201ENST00000431037 1228 ntBASIC7.4□□□□□ -1.22
LINC01554Q52M75 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
LINC01554Q52M75 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC7.4□□□□□ -1.22
LINC01554Q52M75 BET1L-206ENST00000486280 665 ntTSL 3 BASIC7.4□□□□□ -1.22
LINC01554Q52M75 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC7.4□□□□□ -1.22
LINC01554Q52M75 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC7.4□□□□□ -1.22
LINC01554Q52M75 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
LINC01554Q52M75 LTBR-211ENST00000543190 785 ntTSL 3 BASIC7.4□□□□□ -1.22
LINC01554Q52M75 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC7.4□□□□□ -1.22
LINC01554Q52M75 NME3-204ENST00000563498 920 ntTSL 2 BASIC7.4□□□□□ -1.22
LINC01554Q52M75 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC7.4□□□□□ -1.22
LINC01554Q52M75 AL589182.2-201ENST00000619332 1049 ntBASIC7.4□□□□□ -1.22
LINC01554Q52M75 AL139288.1-201ENST00000623748 933 ntBASIC7.4□□□□□ -1.22
LINC01554Q52M75 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC7.4□□□□□ -1.22
LINC01554Q52M75 KLF11-206ENST00000540845 3885 ntAPPRIS ALT2 TSL 2 BASIC7.4□□□□□ -1.22
LINC01554Q52M75 ARHGAP6-201ENST00000303025 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
LINC01554Q52M75 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
LINC01554Q52M75 TXLNG-202ENST00000398155 3998 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
LINC01554Q52M75 GNG7-201ENST00000382159 4208 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
LINC01554Q52M75 NPEPPS-201ENST00000322157 4353 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
LINC01554Q52M75 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
LINC01554Q52M75 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
LINC01554Q52M75 AC008677.1-201ENST00000519230 1561 ntBASIC7.4□□□□□ -1.22
LINC01554Q52M75 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC7.4□□□□□ -1.22
LINC01554Q52M75 AMBRA1-201ENST00000314845 5023 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
LINC01554Q52M75 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
LINC01554Q52M75 ERP29-201ENST00000261735 1735 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
LINC01554Q52M75 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC7.4□□□□□ -1.23
LINC01554Q52M75 C1orf27-203ENST00000419367 1900 ntTSL 2 BASIC7.4□□□□□ -1.23
LINC01554Q52M75 ELP4-222ENST00000640231 2062 ntTSL 5 BASIC7.4□□□□□ -1.23
LINC01554Q52M75 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC7.4□□□□□ -1.23
LINC01554Q52M75 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC7.4□□□□□ -1.23
LINC01554Q52M75 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC7.4□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms