RNA–Protein interactions for RNA: ENST00000395529.7

SPECC1-205, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, humanhuman

TSL 1 (best) BASIC

Gene SPECC1, Length 4,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPECC1-205ENST00000395529 DCAF8L2P0C7V8 631 aa19.09■□□□□ 0.65
SPECC1-205ENST00000395529 SUPT5HO00267 1087 aaKnown RBP18.12■□□□□ 0.49
SPECC1-205ENST00000395529 EHMT2Q96KQ7 1210 aa17.83■□□□□ 0.45
SPECC1-205ENST00000395529 PELP1Q8IZL8 1130 aaKnown RBP17.73■□□□□ 0.43
SPECC1-205ENST00000395529 SHROOM4Q9ULL8 1493 aa17.6■□□□□ 0.41
SPECC1-205ENST00000395529 APLP2Q06481 763 aa17.29■□□□□ 0.36
SPECC1-205ENST00000395529 TTBK1Q5TCY1 1321 aaPredicted RBP17.23■□□□□ 0.35
SPECC1-205ENST00000395529 FAM9AQ8IZU1 332 aaPredicted RBP17.2■□□□□ 0.34
SPECC1-205ENST00000395529 PCGF6Q9BYE7 350 aa17.07■□□□□ 0.32
SPECC1-205ENST00000395529 ERICH6Q7L0X2 663 aa17.01■□□□□ 0.31
SPECC1-205ENST00000395529 NISCHQ9Y2I1 1504 aa16.97■□□□□ 0.31
SPECC1-205ENST00000395529 RANGAP1P46060 587 aaPredicted RBP16.96■□□□□ 0.3
SPECC1-205ENST00000395529 CCER1Q8TC90 406 aaPredicted RBP16.9■□□□□ 0.3
SPECC1-205ENST00000395529 CENPBP07199 599 aaPredicted RBP16.82■□□□□ 0.28
SPECC1-205ENST00000395529 MYT1Q01538 1121 aa16.8■□□□□ 0.28
SPECC1-205ENST00000395529 ATP1B4Q9UN42 357 aaPredicted RBP16.76■□□□□ 0.27
SPECC1-205ENST00000395529 TRIM41Q8WV44 630 aa16.63■□□□□ 0.25
SPECC1-205ENST00000395529 YTHDC1Q96MU7 727 aaKnown RBP16.62■□□□□ 0.25
SPECC1-205ENST00000395529 ZEB1P37275 1124 aaPredicted RBP16.59■□□□□ 0.25
SPECC1-205ENST00000395529 UBTFP17480 764 aaKnown RBP16.56■□□□□ 0.24
SPECC1-205ENST00000395529 NEFLP07196 543 aa16.54■□□□□ 0.24
SPECC1-205ENST00000395529 PPARGC1BQ86YN6 1023 aaKnown RBP16.47■□□□□ 0.23
SPECC1-205ENST00000395529 POLR3GLQ9BT43 218 aa16.23■□□□□ 0.19
SPECC1-205ENST00000395529 ITGAEP38570 1179 aa16.21■□□□□ 0.19
SPECC1-205ENST00000395529 CNGB1Q14028 1251 aaPredicted RBP16.19■□□□□ 0.18
SPECC1-205ENST00000395529 DAXXQ9UER7 740 aaPredicted RBP16.14■□□□□ 0.17
SPECC1-205ENST00000395529 MYT1LQ9UL68 1186 aa16.13■□□□□ 0.17
SPECC1-205ENST00000395529 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.1■□□□□ 0.17
SPECC1-205ENST00000395529 HNRNPUL2Q1KMD3 747 aaKnown RBP16.1■□□□□ 0.17
SPECC1-205ENST00000395529 TRIM26Q12899 539 aaPredicted RBP16.08■□□□□ 0.16
SPECC1-205ENST00000395529 HRCP23327 699 aa16.07■□□□□ 0.16
SPECC1-205ENST00000395529 LOC105371045A0A1W2PR82 267 aa15.97■□□□□ 0.15
SPECC1-205ENST00000395529 CHIC1Q5VXU3 224 aa15.96■□□□□ 0.15
SPECC1-205ENST00000395529 SLC4A1APQ9BWU0 796 aaKnown RBP15.89■□□□□ 0.13
SPECC1-205ENST00000395529 CLSPNQ9HAW4 1339 aa15.83■□□□□ 0.12
SPECC1-205ENST00000395529 RTL5Q5HYW3 569 aaPredicted RBP15.79■□□□□ 0.12
SPECC1-205ENST00000395529 ZNF316A6NFI3 1004 aaPredicted RBP15.74■□□□□ 0.11
SPECC1-205ENST00000395529 DIEXFQ68CQ4 756 aaKnown RBP15.72■□□□□ 0.11
SPECC1-205ENST00000395529 BCANQ96GW7 911 aa15.65■□□□□ 0.1
SPECC1-205ENST00000395529 FAM50AQ14320 339 aaKnown RBP15.63■□□□□ 0.09
SPECC1-205ENST00000395529 NEUROD1Q13562 356 aa15.59■□□□□ 0.09
SPECC1-205ENST00000395529 TRIM52Q96A61 297 aa15.59■□□□□ 0.09
SPECC1-205ENST00000395529 ZNF326Q5BKZ1 582 aaKnown RBP15.54■□□□□ 0.08
SPECC1-205ENST00000395529 BCL11AQ9H165 835 aa15.53■□□□□ 0.08
SPECC1-205ENST00000395529 GTF3C3Q9Y5Q9 886 aa15.49■□□□□ 0.07
SPECC1-205ENST00000395529 ZBTB47Q9UFB7 747 aaPredicted RBP15.41■□□□□ 0.06
SPECC1-205ENST00000395529 ANP32CO43423 234 aa15.41■□□□□ 0.06
SPECC1-205ENST00000395529 SLC24A1O60721 1099 aa15.4■□□□□ 0.06
SPECC1-205ENST00000395529 CDK11AQ9UQ88 783 aaPredicted RBP15.38■□□□□ 0.05
SPECC1-205ENST00000395529 CANXP27824 592 aaKnown RBP15.32■□□□□ 0.04
SPECC1-205ENST00000395529 FBLN2P98095 1184 aa15.3■□□□□ 0.04
SPECC1-205ENST00000395529 PABPN1Q86U42 306 aaKnown RBP eCLIP15.27■□□□□ 0.04
SPECC1-205ENST00000395529 ARID3CA6NKF2 412 aa15.27■□□□□ 0.03
SPECC1-205ENST00000395529 EIF5BO60841 1220 aaKnown RBP15.22■□□□□ 0.03
SPECC1-205ENST00000395529 NPM2Q86SE8 214 aaKnown RBP15.22■□□□□ 0.03
SPECC1-205ENST00000395529 P3H3Q8IVL6 736 aa15.21■□□□□ 0.02
SPECC1-205ENST00000395529 NEFMP07197 916 aa15.2■□□□□ 0.02
SPECC1-205ENST00000395529 ANP32AP39687 249 aaKnown RBP15.16■□□□□ 0.02
SPECC1-205ENST00000395529 GLIPR1L2Q4G1C9 344 aa15.15■□□□□ 0.02
SPECC1-205ENST00000395529 ACIN1Q9UKV3 1341 aaKnown RBP15.12■□□□□ 0.01
SPECC1-205ENST00000395529 ZNF777Q9ULD5 760 aaPredicted RBP15.12■□□□□ 0.01
SPECC1-205ENST00000395529 FKBP8Q14318 412 aa15.05■□□□□ -0
SPECC1-205ENST00000395529 SALL2Q9Y467 1007 aaPredicted RBP15.05■□□□□ -0
SPECC1-205ENST00000395529 HSP90AA1P07900 732 aaKnown RBP15.04■□□□□ -0
SPECC1-205ENST00000395529 ANP32BQ92688 251 aaKnown RBP15.02□□□□□ -0.01
SPECC1-205ENST00000395529 HNRNPUQ00839 825 aaKnown RBP eCLIP15.01□□□□□ -0.01
SPECC1-205ENST00000395529 CHGAP10645 457 aaKnown RBP15□□□□□ -0.01
SPECC1-205ENST00000395529 FAM9BQ8IZU0 186 aa14.99□□□□□ -0.01
SPECC1-205ENST00000395529 CSRNP3Q8WYN3 585 aa14.98□□□□□ -0.01
SPECC1-205ENST00000395529 ABCC9O60706 1549 aa14.98□□□□□ -0.01
SPECC1-205ENST00000395529 PLPPR3Q6T4P5 718 aa14.97□□□□□ -0.01
SPECC1-205ENST00000395529 DDX10Q13206 875 aaKnown RBP14.96□□□□□ -0.01
SPECC1-205ENST00000395529 ARXQ96QS3 562 aa14.93□□□□□ -0.02
SPECC1-205ENST00000395529 ESF1Q9H501 851 aaKnown RBP14.92□□□□□ -0.02
SPECC1-205ENST00000395529 UPF2Q9HAU5 1272 aaKnown RBP14.91□□□□□ -0.02
SPECC1-205ENST00000395529 TONSLQ96HA7 1378 aa14.91□□□□□ -0.02
SPECC1-205ENST00000395529 STAG3Q9UJ98 1225 aa14.91□□□□□ -0.02
SPECC1-205ENST00000395529 NBR1Q14596 966 aa14.88□□□□□ -0.03
SPECC1-205ENST00000395529 CCDC136Q96JN2 1154 aa14.86□□□□□ -0.03
SPECC1-205ENST00000395529 TMC1Q8TDI8 760 aa14.84□□□□□ -0.03
SPECC1-205ENST00000395529 CHIC2Q9UKJ5 165 aa14.83□□□□□ -0.04
SPECC1-205ENST00000395529 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.81□□□□□ -0.04
SPECC1-205ENST00000395529 IRX6P78412 446 aaPredicted RBP14.8□□□□□ -0.04
SPECC1-205ENST00000395529 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.8□□□□□ -0.04
SPECC1-205ENST00000395529 HIRIP3Q9BW71 556 aaPredicted RBP14.77□□□□□ -0.04
SPECC1-205ENST00000395529 MRS2Q9HD23 443 aa14.77□□□□□ -0.04
SPECC1-205ENST00000395529 KDM2AQ9Y2K7 1162 aa14.77□□□□□ -0.05
SPECC1-205ENST00000395529 WDR43Q15061 677 aaKnown RBP eCLIP14.73□□□□□ -0.05
SPECC1-205ENST00000395529 SENP3Q9H4L4 574 aaPredicted RBP14.73□□□□□ -0.05
SPECC1-205ENST00000395529 PLEKHG5O94827 1062 aa14.71□□□□□ -0.05
SPECC1-205ENST00000395529 A0A0G2JS52 829 aa14.71□□□□□ -0.05
SPECC1-205ENST00000395529 SCAF1Q9H7N4 1312 aaKnown RBP14.7□□□□□ -0.06
SPECC1-205ENST00000395529 NPM1P06748 294 aaKnown RBP eCLIP14.69□□□□□ -0.06
SPECC1-205ENST00000395529 SENP3-EIF4A1A0A087X0R7 540 aa14.69□□□□□ -0.06
SPECC1-205ENST00000395529 MIER1Q8N108 512 aa14.66□□□□□ -0.06
SPECC1-205ENST00000395529 TSPY4P0CV99 314 aa14.64□□□□□ -0.07
SPECC1-205ENST00000395529 TSPY10P0CW01 314 aa14.64□□□□□ -0.07
SPECC1-205ENST00000395529 TNNT2P45379 298 aaPredicted RBP14.62□□□□□ -0.07
SPECC1-205ENST00000395529 CDK11BP21127 795 aaKnown RBP14.6□□□□□ -0.07
SPECC1-205ENST00000395529 MYH16Q9H6N6 1097 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms