RNA–Protein interactions for RNA: ENST00000403714.7

EFR3B-204, Transcript of EFR3 homolog B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene EFR3B, Length 7,434 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFR3B-204ENST00000403714 DCAF8L2P0C7V8 631 aa19.78■□□□□ 0.76
EFR3B-204ENST00000403714 EHMT2Q96KQ7 1210 aa18.16■□□□□ 0.5
EFR3B-204ENST00000403714 SUPT5HO00267 1087 aaKnown RBP17.86■□□□□ 0.45
EFR3B-204ENST00000403714 SHROOM4Q9ULL8 1493 aa17.6■□□□□ 0.41
EFR3B-204ENST00000403714 RANGAP1P46060 587 aaPredicted RBP17.39■□□□□ 0.37
EFR3B-204ENST00000403714 TTBK1Q5TCY1 1321 aaPredicted RBP17.37■□□□□ 0.37
EFR3B-204ENST00000403714 FAM9AQ8IZU1 332 aaPredicted RBP17.36■□□□□ 0.37
EFR3B-204ENST00000403714 ATP1B4Q9UN42 357 aaPredicted RBP17.27■□□□□ 0.36
EFR3B-204ENST00000403714 APLP2Q06481 763 aa17.22■□□□□ 0.35
EFR3B-204ENST00000403714 MYT1LQ9UL68 1186 aa16.98■□□□□ 0.31
EFR3B-204ENST00000403714 CHIC1Q5VXU3 224 aa16.93■□□□□ 0.3
EFR3B-204ENST00000403714 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.64■□□□□ 0.25
EFR3B-204ENST00000403714 HNRNPUL2Q1KMD3 747 aaKnown RBP16.64■□□□□ 0.25
EFR3B-204ENST00000403714 PELP1Q8IZL8 1130 aaKnown RBP16.55■□□□□ 0.24
EFR3B-204ENST00000403714 NISCHQ9Y2I1 1504 aa16.52■□□□□ 0.24
EFR3B-204ENST00000403714 PCGF6Q9BYE7 350 aa16.52■□□□□ 0.23
EFR3B-204ENST00000403714 UBTFP17480 764 aaKnown RBP16.49■□□□□ 0.23
EFR3B-204ENST00000403714 POLR3GLQ9BT43 218 aa16.43■□□□□ 0.22
EFR3B-204ENST00000403714 CNGB1Q14028 1251 aaPredicted RBP16.41■□□□□ 0.22
EFR3B-204ENST00000403714 SLC4A1APQ9BWU0 796 aaKnown RBP16.4■□□□□ 0.22
EFR3B-204ENST00000403714 TRIM41Q8WV44 630 aa16.3■□□□□ 0.2
EFR3B-204ENST00000403714 PPARGC1BQ86YN6 1023 aaKnown RBP16.29■□□□□ 0.2
EFR3B-204ENST00000403714 ITGAEP38570 1179 aa16.27■□□□□ 0.2
EFR3B-204ENST00000403714 ERICH6Q7L0X2 663 aa16.25■□□□□ 0.19
EFR3B-204ENST00000403714 PLPPR3Q6T4P5 718 aa16.22■□□□□ 0.19
EFR3B-204ENST00000403714 CCER1Q8TC90 406 aaPredicted RBP16.17■□□□□ 0.18
EFR3B-204ENST00000403714 FBLN2P98095 1184 aa16.08■□□□□ 0.16
EFR3B-204ENST00000403714 YTHDC1Q96MU7 727 aaKnown RBP16.04■□□□□ 0.16
EFR3B-204ENST00000403714 BCANQ96GW7 911 aa16.04■□□□□ 0.16
EFR3B-204ENST00000403714 SLC24A1O60721 1099 aa16.02■□□□□ 0.16
EFR3B-204ENST00000403714 PABPN1Q86U42 306 aaKnown RBP eCLIP15.93■□□□□ 0.14
EFR3B-204ENST00000403714 BCL11AQ9H165 835 aa15.87■□□□□ 0.13
EFR3B-204ENST00000403714 NEFLP07196 543 aa15.86■□□□□ 0.13
EFR3B-204ENST00000403714 ARID3CA6NKF2 412 aa15.76■□□□□ 0.11
EFR3B-204ENST00000403714 MYT1Q01538 1121 aa15.73■□□□□ 0.11
EFR3B-204ENST00000403714 DAXXQ9UER7 740 aaPredicted RBP15.71■□□□□ 0.11
EFR3B-204ENST00000403714 CENPBP07199 599 aaPredicted RBP15.68■□□□□ 0.1
EFR3B-204ENST00000403714 TRIM52Q96A61 297 aa15.66■□□□□ 0.1
EFR3B-204ENST00000403714 ZNF326Q5BKZ1 582 aaKnown RBP15.64■□□□□ 0.09
EFR3B-204ENST00000403714 FAM50AQ14320 339 aaKnown RBP15.64■□□□□ 0.09
EFR3B-204ENST00000403714 ESF1Q9H501 851 aaKnown RBP15.64■□□□□ 0.09
EFR3B-204ENST00000403714 A0A0G2JS52 829 aa15.63■□□□□ 0.09
EFR3B-204ENST00000403714 ABCC9O60706 1549 aa15.62■□□□□ 0.09
EFR3B-204ENST00000403714 PLEKHG5O94827 1062 aa15.61■□□□□ 0.09
EFR3B-204ENST00000403714 SCAF1Q9H7N4 1312 aaKnown RBP15.6■□□□□ 0.09
EFR3B-204ENST00000403714 CLSPNQ9HAW4 1339 aa15.59■□□□□ 0.09
EFR3B-204ENST00000403714 SENP3Q9H4L4 574 aaPredicted RBP15.51■□□□□ 0.07
EFR3B-204ENST00000403714 STAG3Q9UJ98 1225 aa15.49■□□□□ 0.07
EFR3B-204ENST00000403714 CHGAP10645 457 aaKnown RBP15.45■□□□□ 0.06
EFR3B-204ENST00000403714 NEUROD1Q13562 356 aa15.44■□□□□ 0.06
EFR3B-204ENST00000403714 ZNF777Q9ULD5 760 aaPredicted RBP15.44■□□□□ 0.06
EFR3B-204ENST00000403714 P3H3Q8IVL6 736 aa15.44■□□□□ 0.06
EFR3B-204ENST00000403714 ZEB1P37275 1124 aaPredicted RBP15.39■□□□□ 0.05
EFR3B-204ENST00000403714 ZBTB47Q9UFB7 747 aaPredicted RBP15.38■□□□□ 0.05
EFR3B-204ENST00000403714 NPM1P06748 294 aaKnown RBP eCLIP15.36■□□□□ 0.05
EFR3B-204ENST00000403714 LOC105371045A0A1W2PR82 267 aa15.34■□□□□ 0.05
EFR3B-204ENST00000403714 ZBTB7CA1YPR0 619 aa15.34■□□□□ 0.05
EFR3B-204ENST00000403714 ZNF316A6NFI3 1004 aaPredicted RBP15.3■□□□□ 0.04
EFR3B-204ENST00000403714 NEFMP07197 916 aa15.27■□□□□ 0.03
EFR3B-204ENST00000403714 CANXP27824 592 aaKnown RBP15.22■□□□□ 0.03
EFR3B-204ENST00000403714 C14orf37Q86TY3 774 aa15.2■□□□□ 0.02
EFR3B-204ENST00000403714 TRHP20396 242 aaPredicted RBP15.2■□□□□ 0.02
EFR3B-204ENST00000403714 ARID4BQ4LE39 1312 aaPredicted RBP15.15■□□□□ 0.02
EFR3B-204ENST00000403714 HAP1P54257 671 aaPredicted RBP15.14■□□□□ 0.01
EFR3B-204ENST00000403714 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.13■□□□□ 0.01
EFR3B-204ENST00000403714 ARXQ96QS3 562 aa15.07■□□□□ 0
EFR3B-204ENST00000403714 TRIM26Q12899 539 aaPredicted RBP15.04■□□□□ -0
EFR3B-204ENST00000403714 NPM2Q86SE8 214 aaKnown RBP15.01□□□□□ -0.01
EFR3B-204ENST00000403714 TULP1O00294 542 aaPredicted RBP14.98□□□□□ -0.01
EFR3B-204ENST00000403714 KCNH8Q96L42 1107 aa14.98□□□□□ -0.01
EFR3B-204ENST00000403714 LMOD2Q6P5Q4 547 aa14.95□□□□□ -0.02
EFR3B-204ENST00000403714 PPP1R15AO75807 674 aaPredicted RBP14.93□□□□□ -0.02
EFR3B-204ENST00000403714 SALL2Q9Y467 1007 aaPredicted RBP14.91□□□□□ -0.02
EFR3B-204ENST00000403714 NPHP1O15259 732 aa14.9□□□□□ -0.02
EFR3B-204ENST00000403714 CDK11AQ9UQ88 783 aaPredicted RBP14.89□□□□□ -0.03
EFR3B-204ENST00000403714 CHMP7Q8WUX9 453 aaPredicted RBP14.89□□□□□ -0.03
EFR3B-204ENST00000403714 RTL5Q5HYW3 569 aaPredicted RBP14.88□□□□□ -0.03
EFR3B-204ENST00000403714 CHIC2Q9UKJ5 165 aa14.84□□□□□ -0.03
EFR3B-204ENST00000403714 ANP32CO43423 234 aa14.84□□□□□ -0.03
EFR3B-204ENST00000403714 HRCP23327 699 aa14.83□□□□□ -0.03
EFR3B-204ENST00000403714 KDM2AQ9Y2K7 1162 aa14.83□□□□□ -0.04
EFR3B-204ENST00000403714 NCBP3Q53F19 620 aaKnown RBP14.8□□□□□ -0.04
EFR3B-204ENST00000403714 MLECQ14165 292 aa14.79□□□□□ -0.04
EFR3B-204ENST00000403714 AEBP2Q6ZN18 517 aaPredicted RBP14.78□□□□□ -0.04
EFR3B-204ENST00000403714 TAOK2Q9UL54 1235 aa14.73□□□□□ -0.05
EFR3B-204ENST00000403714 HSP90AA1P07900 732 aaKnown RBP14.7□□□□□ -0.06
EFR3B-204ENST00000403714 DIEXFQ68CQ4 756 aaKnown RBP14.7□□□□□ -0.06
EFR3B-204ENST00000403714 PPM1GO15355 546 aaPredicted RBP14.7□□□□□ -0.06
EFR3B-204ENST00000403714 TMC1Q8TDI8 760 aa14.66□□□□□ -0.06
EFR3B-204ENST00000403714 TSPY4P0CV99 314 aa14.63□□□□□ -0.07
EFR3B-204ENST00000403714 TSPY10P0CW01 314 aa14.63□□□□□ -0.07
EFR3B-204ENST00000403714 CDK11BP21127 795 aaKnown RBP14.62□□□□□ -0.07
EFR3B-204ENST00000403714 SOX12O15370 315 aa14.61□□□□□ -0.07
EFR3B-204ENST00000403714 CCDC9Q9Y3X0 531 aaKnown RBP14.6□□□□□ -0.07
EFR3B-204ENST00000403714 RGL3Q3MIN7 710 aa14.58□□□□□ -0.07
EFR3B-204ENST00000403714 FAM9BQ8IZU0 186 aa14.57□□□□□ -0.08
EFR3B-204ENST00000403714 SENP3-EIF4A1A0A087X0R7 540 aa14.57□□□□□ -0.08
EFR3B-204ENST00000403714 ERCC6Q03468 1493 aa14.56□□□□□ -0.08
EFR3B-204ENST00000403714 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.55□□□□□ -0.08
EFR3B-204ENST00000403714 TPRNQ4KMQ1 711 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms