Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
ERCC6LQ2NKX8 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC15.48■□□□□ 0.07
ERCC6LQ2NKX8 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC15.48■□□□□ 0.07
ERCC6LQ2NKX8 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC15.47■□□□□ 0.07
ERCC6LQ2NKX8 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
ERCC6LQ2NKX8 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
ERCC6LQ2NKX8 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
ERCC6LQ2NKX8 AC093525.8-201ENST00000624099 1342 ntBASIC15.47■□□□□ 0.07
ERCC6LQ2NKX8 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ERCC6LQ2NKX8 TRIM3-203ENST00000525074 3044 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
ERCC6LQ2NKX8 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ERCC6LQ2NKX8 AL359845.1-201ENST00000458202 1648 ntBASIC15.47■□□□□ 0.07
ERCC6LQ2NKX8 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC15.47■□□□□ 0.07
ERCC6LQ2NKX8 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
ERCC6LQ2NKX8 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
ERCC6LQ2NKX8 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC15.47■□□□□ 0.07
ERCC6LQ2NKX8 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
ERCC6LQ2NKX8 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC15.47■□□□□ 0.07
ERCC6LQ2NKX8 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ERCC6LQ2NKX8 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
ERCC6LQ2NKX8 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ERCC6LQ2NKX8 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
ERCC6LQ2NKX8 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
ERCC6LQ2NKX8 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ERCC6LQ2NKX8 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
ERCC6LQ2NKX8 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ERCC6LQ2NKX8 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ERCC6LQ2NKX8 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC15.47■□□□□ 0.07
ERCC6LQ2NKX8 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.47■□□□□ 0.07
ERCC6LQ2NKX8 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
ERCC6LQ2NKX8 AC009474.1-201ENST00000455096 1565 ntBASIC15.47■□□□□ 0.07
ERCC6LQ2NKX8 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.47■□□□□ 0.07
ERCC6LQ2NKX8 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
ERCC6LQ2NKX8 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
ERCC6LQ2NKX8 RN7SL828P-201ENST00000607615 303 ntBASIC15.47■□□□□ 0.07
ERCC6LQ2NKX8 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.47■□□□□ 0.07
ERCC6LQ2NKX8 AC092865.6-201ENST00000642101 219 ntBASIC15.47■□□□□ 0.07
ERCC6LQ2NKX8 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ERCC6LQ2NKX8 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ERCC6LQ2NKX8 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
ERCC6LQ2NKX8 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC15.47■□□□□ 0.07
ERCC6LQ2NKX8 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
ERCC6LQ2NKX8 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.47■□□□□ 0.07
ERCC6LQ2NKX8 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
ERCC6LQ2NKX8 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC15.47■□□□□ 0.07
ERCC6LQ2NKX8 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ERCC6LQ2NKX8 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC15.47■□□□□ 0.07
ERCC6LQ2NKX8 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
ERCC6LQ2NKX8 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
ERCC6LQ2NKX8 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
ERCC6LQ2NKX8 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
ERCC6LQ2NKX8 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ERCC6LQ2NKX8 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ERCC6LQ2NKX8 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
ERCC6LQ2NKX8 BX324167.2-201ENST00000623717 3316 ntBASIC15.46■□□□□ 0.07
ERCC6LQ2NKX8 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
ERCC6LQ2NKX8 GTF2F1-201ENST00000394456 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ERCC6LQ2NKX8 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.46■□□□□ 0.07
ERCC6LQ2NKX8 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ERCC6LQ2NKX8 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ERCC6LQ2NKX8 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ERCC6LQ2NKX8 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
ERCC6LQ2NKX8 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
ERCC6LQ2NKX8 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
ERCC6LQ2NKX8 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ERCC6LQ2NKX8 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
ERCC6LQ2NKX8 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.46■□□□□ 0.07
ERCC6LQ2NKX8 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
ERCC6LQ2NKX8 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ERCC6LQ2NKX8 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.46■□□□□ 0.07
ERCC6LQ2NKX8 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.46■□□□□ 0.07
ERCC6LQ2NKX8 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.46■□□□□ 0.07
ERCC6LQ2NKX8 AC040169.1-201ENST00000565382 521 ntBASIC15.46■□□□□ 0.07
ERCC6LQ2NKX8 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
ERCC6LQ2NKX8 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.46■□□□□ 0.07
ERCC6LQ2NKX8 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.46■□□□□ 0.07
ERCC6LQ2NKX8 AC000095.1-201ENST00000603208 874 ntBASIC15.46■□□□□ 0.07
ERCC6LQ2NKX8 AC026120.1-201ENST00000611536 926 ntBASIC15.46■□□□□ 0.07
ERCC6LQ2NKX8 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.46■□□□□ 0.07
ERCC6LQ2NKX8 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC15.46■□□□□ 0.07
ERCC6LQ2NKX8 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
ERCC6LQ2NKX8 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.46■□□□□ 0.07
ERCC6LQ2NKX8 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ERCC6LQ2NKX8 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
ERCC6LQ2NKX8 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
ERCC6LQ2NKX8 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC15.46■□□□□ 0.07
ERCC6LQ2NKX8 SALL4P5-201ENST00000419001 1760 ntBASIC15.46■□□□□ 0.07
ERCC6LQ2NKX8 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
ERCC6LQ2NKX8 TRIM80P-201ENST00000455685 2848 ntBASIC15.46■□□□□ 0.07
ERCC6LQ2NKX8 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC15.46■□□□□ 0.07
ERCC6LQ2NKX8 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
ERCC6LQ2NKX8 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
ERCC6LQ2NKX8 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
ERCC6LQ2NKX8 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC15.46■□□□□ 0.07
ERCC6LQ2NKX8 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
ERCC6LQ2NKX8 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
ERCC6LQ2NKX8 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
ERCC6LQ2NKX8 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
ERCC6LQ2NKX8 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
ERCC6LQ2NKX8 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms