Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SEC61A1P61619 C2-206ENST00000442278 2434 ntTSL 2 BASIC12.88□□□□□ -0.35
SEC61A1P61619 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
SEC61A1P61619 AL023775.1-201ENST00000454907 1746 ntBASIC12.88□□□□□ -0.35
SEC61A1P61619 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC12.88□□□□□ -0.35
SEC61A1P61619 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
SEC61A1P61619 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SEC61A1P61619 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SEC61A1P61619 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SEC61A1P61619 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SEC61A1P61619 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC12.87□□□□□ -0.35
SEC61A1P61619 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SEC61A1P61619 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC12.87□□□□□ -0.35
SEC61A1P61619 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC12.87□□□□□ -0.35
SEC61A1P61619 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
SEC61A1P61619 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SEC61A1P61619 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SEC61A1P61619 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SEC61A1P61619 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SEC61A1P61619 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
SEC61A1P61619 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SEC61A1P61619 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SEC61A1P61619 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SEC61A1P61619 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SEC61A1P61619 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
SEC61A1P61619 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SEC61A1P61619 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SEC61A1P61619 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
SEC61A1P61619 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
SEC61A1P61619 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SEC61A1P61619 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SEC61A1P61619 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SEC61A1P61619 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC12.87□□□□□ -0.35
SEC61A1P61619 APOA1-205ENST00000375329 927 ntTSL 2 BASIC12.87□□□□□ -0.35
SEC61A1P61619 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC12.87□□□□□ -0.35
SEC61A1P61619 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
SEC61A1P61619 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
SEC61A1P61619 RPL28-203ENST00000428193 573 ntTSL 2 BASIC12.87□□□□□ -0.35
SEC61A1P61619 RPL28-204ENST00000431533 590 ntTSL 2 BASIC12.87□□□□□ -0.35
SEC61A1P61619 ACTG1P3-201ENST00000431775 1114 ntBASIC12.87□□□□□ -0.35
SEC61A1P61619 BCRP2-202ENST00000447763 634 ntBASIC12.87□□□□□ -0.35
SEC61A1P61619 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC12.87□□□□□ -0.35
SEC61A1P61619 BCRP6-201ENST00000510112 632 ntBASIC12.87□□□□□ -0.35
SEC61A1P61619 BCRP7-201ENST00000511549 544 ntBASIC12.87□□□□□ -0.35
SEC61A1P61619 AP001582.1-201ENST00000525856 295 ntBASIC12.87□□□□□ -0.35
SEC61A1P61619 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
SEC61A1P61619 SLC25A47P1-201ENST00000531577 414 ntBASIC12.87□□□□□ -0.35
SEC61A1P61619 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
SEC61A1P61619 SNX29P1-201ENST00000548357 1007 ntBASIC12.87□□□□□ -0.35
SEC61A1P61619 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC12.87□□□□□ -0.35
SEC61A1P61619 RPL28-207ENST00000558815 616 ntTSL 2 BASIC12.87□□□□□ -0.35
SEC61A1P61619 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC12.87□□□□□ -0.35
SEC61A1P61619 AC106886.1-201ENST00000568660 600 ntBASIC12.87□□□□□ -0.35
SEC61A1P61619 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC12.87□□□□□ -0.35
SEC61A1P61619 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC12.87□□□□□ -0.35
SEC61A1P61619 TBCB-211ENST00000589996 724 ntTSL 3 BASIC12.87□□□□□ -0.35
SEC61A1P61619 BTNL10-201ENST00000595971 695 ntBASIC12.87□□□□□ -0.35
SEC61A1P61619 AC233724.13-201ENST00000598383 410 ntBASIC12.87□□□□□ -0.35
SEC61A1P61619 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC12.87□□□□□ -0.35
SEC61A1P61619 AC025181.2-201ENST00000606994 802 ntBASIC12.87□□□□□ -0.35
SEC61A1P61619 AC017083.2-201ENST00000608069 979 ntBASIC12.87□□□□□ -0.35
SEC61A1P61619 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC12.87□□□□□ -0.35
SEC61A1P61619 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC12.87□□□□□ -0.35
SEC61A1P61619 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
SEC61A1P61619 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
SEC61A1P61619 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC12.87□□□□□ -0.35
SEC61A1P61619 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SEC61A1P61619 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SEC61A1P61619 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
SEC61A1P61619 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SEC61A1P61619 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SEC61A1P61619 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SEC61A1P61619 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC12.87□□□□□ -0.35
SEC61A1P61619 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SEC61A1P61619 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SEC61A1P61619 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
SEC61A1P61619 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC12.87□□□□□ -0.35
SEC61A1P61619 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SEC61A1P61619 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SEC61A1P61619 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC12.87□□□□□ -0.35
SEC61A1P61619 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC12.87□□□□□ -0.35
SEC61A1P61619 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC12.87□□□□□ -0.35
SEC61A1P61619 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SEC61A1P61619 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SEC61A1P61619 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SEC61A1P61619 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC12.86□□□□□ -0.35
SEC61A1P61619 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SEC61A1P61619 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SEC61A1P61619 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SEC61A1P61619 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SEC61A1P61619 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
SEC61A1P61619 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
SEC61A1P61619 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SEC61A1P61619 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
SEC61A1P61619 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
SEC61A1P61619 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SEC61A1P61619 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SEC61A1P61619 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC12.86□□□□□ -0.35
SEC61A1P61619 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC12.86□□□□□ -0.35
SEC61A1P61619 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms