Protein–RNA interactions for Protein: P43354

NR4A2, Nuclear receptor subfamily 4 group A member 2, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A2P43354 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NR4A2P43354 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NR4A2P43354 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
NR4A2P43354 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC13.38□□□□□ -0.27
NR4A2P43354 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NR4A2P43354 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
NR4A2P43354 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
NR4A2P43354 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
NR4A2P43354 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NR4A2P43354 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
NR4A2P43354 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NR4A2P43354 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NR4A2P43354 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.38□□□□□ -0.27
NR4A2P43354 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC13.38□□□□□ -0.27
NR4A2P43354 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NR4A2P43354 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
NR4A2P43354 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NR4A2P43354 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NR4A2P43354 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NR4A2P43354 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NR4A2P43354 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NR4A2P43354 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NR4A2P43354 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.37□□□□□ -0.27
NR4A2P43354 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
NR4A2P43354 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
NR4A2P43354 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC13.37□□□□□ -0.27
NR4A2P43354 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
NR4A2P43354 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NR4A2P43354 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NR4A2P43354 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NR4A2P43354 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC13.37□□□□□ -0.27
NR4A2P43354 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
NR4A2P43354 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC13.37□□□□□ -0.27
NR4A2P43354 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC13.37□□□□□ -0.27
NR4A2P43354 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NR4A2P43354 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NR4A2P43354 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NR4A2P43354 AC079776.1-201ENST00000401540 1152 ntBASIC13.37□□□□□ -0.27
NR4A2P43354 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NR4A2P43354 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
NR4A2P43354 AC112492.5-201ENST00000421897 457 ntBASIC13.37□□□□□ -0.27
NR4A2P43354 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC13.37□□□□□ -0.27
NR4A2P43354 ELP6-209ENST00000446787 894 ntTSL 3 BASIC13.37□□□□□ -0.27
NR4A2P43354 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.37□□□□□ -0.27
NR4A2P43354 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.37□□□□□ -0.27
NR4A2P43354 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NR4A2P43354 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC13.37□□□□□ -0.27
NR4A2P43354 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC13.37□□□□□ -0.27
NR4A2P43354 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC13.37□□□□□ -0.27
NR4A2P43354 APOC4-201ENST00000591600 348 ntTSL 3 BASIC13.37□□□□□ -0.27
NR4A2P43354 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.37□□□□□ -0.27
NR4A2P43354 AC097359.3-201ENST00000603982 1210 ntBASIC13.37□□□□□ -0.27
NR4A2P43354 MIR6805-201ENST00000615055 62 ntBASIC13.37□□□□□ -0.27
NR4A2P43354 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.37□□□□□ -0.27
NR4A2P43354 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
NR4A2P43354 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NR4A2P43354 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.37□□□□□ -0.27
NR4A2P43354 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NR4A2P43354 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.37□□□□□ -0.27
NR4A2P43354 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC13.37□□□□□ -0.27
NR4A2P43354 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NR4A2P43354 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NR4A2P43354 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
NR4A2P43354 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
NR4A2P43354 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC13.37□□□□□ -0.27
NR4A2P43354 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
NR4A2P43354 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
NR4A2P43354 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
NR4A2P43354 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NR4A2P43354 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NR4A2P43354 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
NR4A2P43354 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
NR4A2P43354 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NR4A2P43354 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
NR4A2P43354 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
NR4A2P43354 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC13.36□□□□□ -0.27
NR4A2P43354 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
NR4A2P43354 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NR4A2P43354 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NR4A2P43354 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NR4A2P43354 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.36□□□□□ -0.27
NR4A2P43354 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
NR4A2P43354 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NR4A2P43354 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
NR4A2P43354 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
NR4A2P43354 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NR4A2P43354 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NR4A2P43354 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NR4A2P43354 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NR4A2P43354 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NR4A2P43354 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
NR4A2P43354 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
NR4A2P43354 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC13.36□□□□□ -0.27
NR4A2P43354 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NR4A2P43354 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NR4A2P43354 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC13.36□□□□□ -0.27
NR4A2P43354 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC13.36□□□□□ -0.27
NR4A2P43354 NSL1-201ENST00000366976 722 ntTSL 2 BASIC13.36□□□□□ -0.27
NR4A2P43354 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NR4A2P43354 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms