Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
FDFT1P37268 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC14.9□□□□□ -0.02
FDFT1P37268 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.9□□□□□ -0.02
FDFT1P37268 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.89□□□□□ -0.03
FDFT1P37268 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
FDFT1P37268 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
FDFT1P37268 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
FDFT1P37268 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
FDFT1P37268 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
FDFT1P37268 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.89□□□□□ -0.03
FDFT1P37268 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
FDFT1P37268 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
FDFT1P37268 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14.89□□□□□ -0.03
FDFT1P37268 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
FDFT1P37268 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
FDFT1P37268 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
FDFT1P37268 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
FDFT1P37268 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
FDFT1P37268 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC14.89□□□□□ -0.03
FDFT1P37268 HMGN1P19-201ENST00000436976 333 ntBASIC14.89□□□□□ -0.03
FDFT1P37268 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC14.89□□□□□ -0.03
FDFT1P37268 AC007551.1-201ENST00000457394 519 ntBASIC14.89□□□□□ -0.03
FDFT1P37268 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC14.89□□□□□ -0.03
FDFT1P37268 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.89□□□□□ -0.03
FDFT1P37268 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC14.89□□□□□ -0.03
FDFT1P37268 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC14.89□□□□□ -0.03
FDFT1P37268 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
FDFT1P37268 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC14.89□□□□□ -0.03
FDFT1P37268 APRT-204ENST00000563655 709 ntTSL 5 BASIC14.89□□□□□ -0.03
FDFT1P37268 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC14.89□□□□□ -0.03
FDFT1P37268 AL596325.1-201ENST00000563991 1082 ntBASIC14.89□□□□□ -0.03
FDFT1P37268 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC14.89□□□□□ -0.03
FDFT1P37268 AL358472.3-201ENST00000608147 415 ntBASIC14.89□□□□□ -0.03
FDFT1P37268 AC104506.1-201ENST00000609247 429 ntBASIC14.89□□□□□ -0.03
FDFT1P37268 ZACNP1-201ENST00000612259 710 ntBASIC14.89□□□□□ -0.03
FDFT1P37268 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC14.89□□□□□ -0.03
FDFT1P37268 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
FDFT1P37268 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC14.89□□□□□ -0.03
FDFT1P37268 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
FDFT1P37268 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC14.89□□□□□ -0.03
FDFT1P37268 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC14.89□□□□□ -0.03
FDFT1P37268 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC14.89□□□□□ -0.03
FDFT1P37268 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
FDFT1P37268 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
FDFT1P37268 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
FDFT1P37268 CU639417.3-201ENST00000624240 1404 ntBASIC14.89□□□□□ -0.03
FDFT1P37268 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
FDFT1P37268 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
FDFT1P37268 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
FDFT1P37268 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
FDFT1P37268 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
FDFT1P37268 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.89□□□□□ -0.03
FDFT1P37268 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
FDFT1P37268 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
FDFT1P37268 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC14.89□□□□□ -0.03
FDFT1P37268 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
FDFT1P37268 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
FDFT1P37268 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
FDFT1P37268 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.88□□□□□ -0.03
FDFT1P37268 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
FDFT1P37268 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FDFT1P37268 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
FDFT1P37268 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
FDFT1P37268 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FDFT1P37268 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FDFT1P37268 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
FDFT1P37268 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
FDFT1P37268 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
FDFT1P37268 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.88□□□□□ -0.03
FDFT1P37268 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC14.88□□□□□ -0.03
FDFT1P37268 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
FDFT1P37268 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC14.88□□□□□ -0.03
FDFT1P37268 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC14.88□□□□□ -0.03
FDFT1P37268 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
FDFT1P37268 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FDFT1P37268 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FDFT1P37268 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
FDFT1P37268 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC14.88□□□□□ -0.03
FDFT1P37268 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
FDFT1P37268 CICP8-201ENST00000455800 2813 ntBASIC14.88□□□□□ -0.03
FDFT1P37268 AC006001.1-201ENST00000325130 474 ntBASIC14.88□□□□□ -0.03
FDFT1P37268 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
FDFT1P37268 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
FDFT1P37268 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC14.88□□□□□ -0.03
FDFT1P37268 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
FDFT1P37268 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC14.88□□□□□ -0.03
FDFT1P37268 AC132938.2-201ENST00000579188 680 ntBASIC14.88□□□□□ -0.03
FDFT1P37268 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC14.88□□□□□ -0.03
FDFT1P37268 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
FDFT1P37268 AL591163.1-201ENST00000641757 987 ntBASIC14.88□□□□□ -0.03
FDFT1P37268 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FDFT1P37268 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.88□□□□□ -0.03
FDFT1P37268 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.88□□□□□ -0.03
FDFT1P37268 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC14.88□□□□□ -0.03
FDFT1P37268 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
FDFT1P37268 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FDFT1P37268 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FDFT1P37268 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
FDFT1P37268 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC14.88□□□□□ -0.03
FDFT1P37268 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms