Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
PTX3P26022 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC14.02□□□□□ -0.16
PTX3P26022 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
PTX3P26022 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PTX3P26022 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC14.02□□□□□ -0.16
PTX3P26022 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PTX3P26022 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
PTX3P26022 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.02□□□□□ -0.16
PTX3P26022 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14.02□□□□□ -0.16
PTX3P26022 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
PTX3P26022 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
PTX3P26022 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC14.02□□□□□ -0.16
PTX3P26022 HARS-202ENST00000415192 1401 ntTSL 2 BASIC14.02□□□□□ -0.16
PTX3P26022 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC14.02□□□□□ -0.16
PTX3P26022 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PTX3P26022 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
PTX3P26022 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PTX3P26022 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PTX3P26022 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
PTX3P26022 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PTX3P26022 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PTX3P26022 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.02□□□□□ -0.17
PTX3P26022 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC14.02□□□□□ -0.17
PTX3P26022 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PTX3P26022 AC005034.1-201ENST00000426657 489 ntBASIC14.02□□□□□ -0.17
PTX3P26022 AC026954.1-201ENST00000429771 1293 ntBASIC14.02□□□□□ -0.17
PTX3P26022 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PTX3P26022 SKA2-202ENST00000437036 625 ntTSL 2 BASIC14.02□□□□□ -0.17
PTX3P26022 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC14.02□□□□□ -0.17
PTX3P26022 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
PTX3P26022 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC14.02□□□□□ -0.17
PTX3P26022 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC14.02□□□□□ -0.17
PTX3P26022 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC14.02□□□□□ -0.17
PTX3P26022 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PTX3P26022 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
PTX3P26022 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
PTX3P26022 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC14.02□□□□□ -0.17
PTX3P26022 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.02□□□□□ -0.17
PTX3P26022 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PTX3P26022 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
PTX3P26022 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC14.02□□□□□ -0.17
PTX3P26022 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
PTX3P26022 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
PTX3P26022 FUK-202ENST00000378912 3925 ntTSL 2 BASIC14.02□□□□□ -0.17
PTX3P26022 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.02□□□□□ -0.17
PTX3P26022 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
PTX3P26022 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
PTX3P26022 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
PTX3P26022 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
PTX3P26022 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
PTX3P26022 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PTX3P26022 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PTX3P26022 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PTX3P26022 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.01□□□□□ -0.17
PTX3P26022 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
PTX3P26022 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC14.01□□□□□ -0.17
PTX3P26022 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PTX3P26022 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PTX3P26022 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC14.01□□□□□ -0.17
PTX3P26022 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
PTX3P26022 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.01□□□□□ -0.17
PTX3P26022 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
PTX3P26022 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
PTX3P26022 TCAM1P-207ENST00000485295 1537 ntBASIC14.01□□□□□ -0.17
PTX3P26022 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC14.01□□□□□ -0.17
PTX3P26022 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC14.01□□□□□ -0.17
PTX3P26022 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PTX3P26022 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
PTX3P26022 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PTX3P26022 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PTX3P26022 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.01□□□□□ -0.17
PTX3P26022 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PTX3P26022 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
PTX3P26022 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PTX3P26022 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
PTX3P26022 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PTX3P26022 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PTX3P26022 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PTX3P26022 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC14.01□□□□□ -0.17
PTX3P26022 HNRNPA1P27-201ENST00000412087 955 ntBASIC14.01□□□□□ -0.17
PTX3P26022 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14.01□□□□□ -0.17
PTX3P26022 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC14.01□□□□□ -0.17
PTX3P26022 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PTX3P26022 AC104989.1-201ENST00000519711 778 ntBASIC14.01□□□□□ -0.17
PTX3P26022 NCK2-206ENST00000522586 490 ntTSL 5 BASIC14.01□□□□□ -0.17
PTX3P26022 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC14.01□□□□□ -0.17
PTX3P26022 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC14.01□□□□□ -0.17
PTX3P26022 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC14.01□□□□□ -0.17
PTX3P26022 AC005586.2-201ENST00000563946 837 ntBASIC14.01□□□□□ -0.17
PTX3P26022 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC14.01□□□□□ -0.17
PTX3P26022 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PTX3P26022 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
PTX3P26022 AC016397.2-201ENST00000624848 1985 ntBASIC14.01□□□□□ -0.17
PTX3P26022 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
PTX3P26022 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC14.01□□□□□ -0.17
PTX3P26022 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
PTX3P26022 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
PTX3P26022 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
PTX3P26022 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
PTX3P26022 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms