Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHGAP10645 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC20.76■□□□□ 0.91
CHGAP10645 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHGAP10645 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHGAP10645 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CHGAP10645 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CHGAP10645 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHGAP10645 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHGAP10645 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHGAP10645 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHGAP10645 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHGAP10645 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHGAP10645 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC20.75■□□□□ 0.91
CHGAP10645 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC20.75■□□□□ 0.91
CHGAP10645 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHGAP10645 IL12A-202ENST00000466512 1283 ntTSL 3 BASIC20.75■□□□□ 0.91
CHGAP10645 AC024293.1-201ENST00000467930 498 ntBASIC20.75■□□□□ 0.91
CHGAP10645 PGAM1P12-201ENST00000505622 748 ntBASIC20.75■□□□□ 0.91
CHGAP10645 RNA5SP406-201ENST00000516106 112 ntBASIC20.75■□□□□ 0.91
CHGAP10645 RN7SL665P-201ENST00000578793 300 ntBASIC20.75■□□□□ 0.91
CHGAP10645 AC140113.1-201ENST00000603467 169 ntBASIC20.75■□□□□ 0.91
CHGAP10645 AC002044.2-201ENST00000624910 970 ntBASIC20.75■□□□□ 0.91
CHGAP10645 AC073347.1-201ENST00000421633 2643 ntBASIC20.75■□□□□ 0.91
CHGAP10645 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CHGAP10645 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHGAP10645 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHGAP10645 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CHGAP10645 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHGAP10645 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC20.75■□□□□ 0.91
CHGAP10645 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC20.75■□□□□ 0.91
CHGAP10645 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHGAP10645 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CHGAP10645 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHGAP10645 AC063926.3-201ENST00000624734 5658 ntBASIC20.75■□□□□ 0.91
CHGAP10645 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC20.75■□□□□ 0.91
CHGAP10645 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC20.75■□□□□ 0.91
CHGAP10645 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
CHGAP10645 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC20.75■□□□□ 0.91
CHGAP10645 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC20.75■□□□□ 0.91
CHGAP10645 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHGAP10645 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHGAP10645 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHGAP10645 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHGAP10645 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CHGAP10645 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC20.74■□□□□ 0.91
CHGAP10645 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC20.74■□□□□ 0.91
CHGAP10645 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CHGAP10645 AC021305.1-201ENST00000520656 1514 ntBASIC20.74■□□□□ 0.91
CHGAP10645 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHGAP10645 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CHGAP10645 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CHGAP10645 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHGAP10645 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHGAP10645 DCD-201ENST00000293371 645 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHGAP10645 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHGAP10645 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CHGAP10645 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHGAP10645 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CHGAP10645 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CHGAP10645 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC20.74■□□□□ 0.91
CHGAP10645 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC20.74■□□□□ 0.91
CHGAP10645 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC20.74■□□□□ 0.91
CHGAP10645 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC20.74■□□□□ 0.91
CHGAP10645 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC20.74■□□□□ 0.91
CHGAP10645 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CHGAP10645 AL022344.2-201ENST00000568976 968 ntBASIC20.74■□□□□ 0.91
CHGAP10645 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHGAP10645 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC20.74■□□□□ 0.91
CHGAP10645 AL161772.1-201ENST00000610494 4412 ntBASIC20.74■□□□□ 0.91
CHGAP10645 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHGAP10645 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC20.74■□□□□ 0.91
CHGAP10645 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CHGAP10645 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CHGAP10645 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CHGAP10645 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CHGAP10645 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CHGAP10645 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CHGAP10645 AC018529.2-202ENST00000611482 3087 ntBASIC20.74■□□□□ 0.91
CHGAP10645 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHGAP10645 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC20.74■□□□□ 0.91
CHGAP10645 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHGAP10645 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHGAP10645 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHGAP10645 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHGAP10645 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
CHGAP10645 PARN-202ENST00000420015 2360 ntTSL 2 BASIC20.73■□□□□ 0.91
CHGAP10645 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC20.73■□□□□ 0.91
CHGAP10645 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC20.73■□□□□ 0.91
CHGAP10645 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHGAP10645 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHGAP10645 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC20.73■□□□□ 0.91
CHGAP10645 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHGAP10645 IDS-203ENST00000428056 1213 ntTSL 2 BASIC20.73■□□□□ 0.91
CHGAP10645 CSNK1G2P1-201ENST00000442675 955 ntBASIC20.73■□□□□ 0.91
CHGAP10645 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC20.73■□□□□ 0.91
CHGAP10645 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CHGAP10645 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC20.73■□□□□ 0.91
CHGAP10645 TNFRSF10A-AS1-201ENST00000518308 637 ntTSL 3 BASIC20.73■□□□□ 0.91
CHGAP10645 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC20.73■□□□□ 0.91
CHGAP10645 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms