Protein–RNA interactions for Protein: P09110

ACAA1, 3-ketoacyl-CoA thiolase, peroxisomal, humanhuman

Predicted RBP Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACAA1P09110 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
ACAA1P09110 TKT-201ENST00000296289 1931 ntTSL 5 BASIC12.59□□□□□ -0.39
ACAA1P09110 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
ACAA1P09110 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
ACAA1P09110 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ACAA1P09110 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC12.59□□□□□ -0.39
ACAA1P09110 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
ACAA1P09110 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ACAA1P09110 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC12.59□□□□□ -0.39
ACAA1P09110 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC12.59□□□□□ -0.39
ACAA1P09110 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
ACAA1P09110 AC092933.1-201ENST00000393644 945 ntBASIC12.59□□□□□ -0.39
ACAA1P09110 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
ACAA1P09110 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC12.59□□□□□ -0.39
ACAA1P09110 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC12.59□□□□□ -0.39
ACAA1P09110 TMEM14DP-201ENST00000422205 345 ntBASIC12.59□□□□□ -0.39
ACAA1P09110 GSAP-205ENST00000430584 600 ntTSL 5 BASIC12.59□□□□□ -0.39
ACAA1P09110 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC12.59□□□□□ -0.39
ACAA1P09110 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC12.59□□□□□ -0.39
ACAA1P09110 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC12.59□□□□□ -0.39
ACAA1P09110 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC12.59□□□□□ -0.39
ACAA1P09110 AC106760.1-201ENST00000508690 800 ntBASIC12.59□□□□□ -0.39
ACAA1P09110 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ACAA1P09110 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC12.59□□□□□ -0.39
ACAA1P09110 RPL28-206ENST00000558752 671 ntTSL 3 BASIC12.59□□□□□ -0.39
ACAA1P09110 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC12.59□□□□□ -0.39
ACAA1P09110 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC12.59□□□□□ -0.39
ACAA1P09110 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ACAA1P09110 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC12.59□□□□□ -0.39
ACAA1P09110 FTO-214ENST00000636218 2227 ntTSL 5 BASIC12.59□□□□□ -0.39
ACAA1P09110 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
ACAA1P09110 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ACAA1P09110 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
ACAA1P09110 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ACAA1P09110 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ACAA1P09110 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
ACAA1P09110 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ACAA1P09110 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC12.59□□□□□ -0.39
ACAA1P09110 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
ACAA1P09110 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
ACAA1P09110 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
ACAA1P09110 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
ACAA1P09110 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ACAA1P09110 AC063926.2-201ENST00000623766 1308 ntBASIC12.59□□□□□ -0.39
ACAA1P09110 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ACAA1P09110 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
ACAA1P09110 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
ACAA1P09110 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ACAA1P09110 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ACAA1P09110 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC12.58□□□□□ -0.39
ACAA1P09110 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.39
ACAA1P09110 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
ACAA1P09110 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC12.58□□□□□ -0.4
ACAA1P09110 LSS-211ENST00000522411 2523 ntTSL 2 BASIC12.58□□□□□ -0.4
ACAA1P09110 RDX-218ENST00000544551 4117 ntTSL 2 BASIC12.58□□□□□ -0.4
ACAA1P09110 TRIM80P-201ENST00000455685 2848 ntBASIC12.58□□□□□ -0.4
ACAA1P09110 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
ACAA1P09110 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC12.58□□□□□ -0.4
ACAA1P09110 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC12.58□□□□□ -0.4
ACAA1P09110 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
ACAA1P09110 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
ACAA1P09110 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
ACAA1P09110 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC12.58□□□□□ -0.4
ACAA1P09110 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ACAA1P09110 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
ACAA1P09110 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
ACAA1P09110 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ACAA1P09110 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC12.58□□□□□ -0.4
ACAA1P09110 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC12.58□□□□□ -0.4
ACAA1P09110 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
ACAA1P09110 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC12.58□□□□□ -0.4
ACAA1P09110 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ACAA1P09110 KRT43P-201ENST00000434019 910 ntBASIC12.58□□□□□ -0.4
ACAA1P09110 C2orf27AP3-201ENST00000434123 579 ntBASIC12.58□□□□□ -0.4
ACAA1P09110 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC12.58□□□□□ -0.4
ACAA1P09110 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC12.58□□□□□ -0.4
ACAA1P09110 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
ACAA1P09110 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC12.58□□□□□ -0.4
ACAA1P09110 RBM7-207ENST00000544582 692 ntTSL 3 BASIC12.58□□□□□ -0.4
ACAA1P09110 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
ACAA1P09110 APRT-204ENST00000563655 709 ntTSL 5 BASIC12.58□□□□□ -0.4
ACAA1P09110 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC12.58□□□□□ -0.4
ACAA1P09110 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC12.58□□□□□ -0.4
ACAA1P09110 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC12.58□□□□□ -0.4
ACAA1P09110 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
ACAA1P09110 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC12.58□□□□□ -0.4
ACAA1P09110 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
ACAA1P09110 AL354718.3-201ENST00000616414 581 ntBASIC12.58□□□□□ -0.4
ACAA1P09110 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
ACAA1P09110 ETV2-208ENST00000621247 941 ntTSL 5 BASIC12.58□□□□□ -0.4
ACAA1P09110 AP001002.3-201ENST00000623482 206 ntBASIC12.58□□□□□ -0.4
ACAA1P09110 CR382287.1-201ENST00000623954 586 ntBASIC12.58□□□□□ -0.4
ACAA1P09110 AP001972.5-201ENST00000624624 2338 ntBASIC12.58□□□□□ -0.4
ACAA1P09110 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ACAA1P09110 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
ACAA1P09110 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC12.58□□□□□ -0.4
ACAA1P09110 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ACAA1P09110 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
ACAA1P09110 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
ACAA1P09110 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms