Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DQB2P05538 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
HLA-DQB2P05538 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
HLA-DQB2P05538 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DQB2P05538 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC14.74□□□□□ -0.05
HLA-DQB2P05538 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
HLA-DQB2P05538 TUBB8P4-201ENST00000511806 1324 ntBASIC14.74□□□□□ -0.05
HLA-DQB2P05538 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DQB2P05538 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DQB2P05538 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DQB2P05538 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DQB2P05538 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
HLA-DQB2P05538 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DQB2P05538 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DQB2P05538 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DQB2P05538 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC14.74□□□□□ -0.05
HLA-DQB2P05538 MIR1908-201ENST00000410394 80 ntBASIC14.74□□□□□ -0.05
HLA-DQB2P05538 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC14.74□□□□□ -0.05
HLA-DQB2P05538 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC14.74□□□□□ -0.05
HLA-DQB2P05538 POM121L10P-201ENST00000436994 1285 ntBASIC14.74□□□□□ -0.05
HLA-DQB2P05538 SCARNA21-201ENST00000517026 139 ntBASIC14.74□□□□□ -0.05
HLA-DQB2P05538 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC14.74□□□□□ -0.05
HLA-DQB2P05538 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DQB2P05538 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC14.74□□□□□ -0.05
HLA-DQB2P05538 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC14.74□□□□□ -0.05
HLA-DQB2P05538 AC008805.1-201ENST00000590892 364 ntBASIC14.74□□□□□ -0.05
HLA-DQB2P05538 BNIP3P13-201ENST00000599968 566 ntBASIC14.74□□□□□ -0.05
HLA-DQB2P05538 AC007663.3-201ENST00000609632 465 ntBASIC14.74□□□□□ -0.05
HLA-DQB2P05538 AC091271.1-201ENST00000611877 1162 ntBASIC14.74□□□□□ -0.05
HLA-DQB2P05538 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DQB2P05538 AC133540.1-201ENST00000620845 1019 ntBASIC14.74□□□□□ -0.05
HLA-DQB2P05538 AC022748.3-201ENST00000621828 275 ntBASIC14.74□□□□□ -0.05
HLA-DQB2P05538 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DQB2P05538 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DQB2P05538 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DQB2P05538 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DQB2P05538 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
HLA-DQB2P05538 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DQB2P05538 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
HLA-DQB2P05538 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DQB2P05538 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DQB2P05538 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DQB2P05538 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DQB2P05538 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DQB2P05538 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC14.74□□□□□ -0.05
HLA-DQB2P05538 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DQB2P05538 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DQB2P05538 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DQB2P05538 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DQB2P05538 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DQB2P05538 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HLA-DQB2P05538 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
HLA-DQB2P05538 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
HLA-DQB2P05538 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DQB2P05538 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.73□□□□□ -0.05
HLA-DQB2P05538 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DQB2P05538 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DQB2P05538 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DQB2P05538 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DQB2P05538 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DQB2P05538 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DQB2P05538 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DQB2P05538 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DQB2P05538 RPS3-201ENST00000278572 907 ntTSL 3 BASIC14.73□□□□□ -0.05
HLA-DQB2P05538 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DQB2P05538 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC14.73□□□□□ -0.05
HLA-DQB2P05538 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
HLA-DQB2P05538 KRT18P36-201ENST00000411618 1276 ntBASIC14.73□□□□□ -0.05
HLA-DQB2P05538 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC14.73□□□□□ -0.05
HLA-DQB2P05538 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC14.73□□□□□ -0.05
HLA-DQB2P05538 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC14.73□□□□□ -0.05
HLA-DQB2P05538 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DQB2P05538 AL023803.2-201ENST00000620080 638 ntBASIC14.73□□□□□ -0.05
HLA-DQB2P05538 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DQB2P05538 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC14.73□□□□□ -0.05
HLA-DQB2P05538 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DQB2P05538 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.73□□□□□ -0.05
HLA-DQB2P05538 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC14.73□□□□□ -0.05
HLA-DQB2P05538 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DQB2P05538 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
HLA-DQB2P05538 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DQB2P05538 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DQB2P05538 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
HLA-DQB2P05538 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
HLA-DQB2P05538 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DQB2P05538 FAM90A7P-201ENST00000382628 1395 ntBASIC14.73□□□□□ -0.05
HLA-DQB2P05538 FAM90A23P-201ENST00000400136 1395 ntBASIC14.73□□□□□ -0.05
HLA-DQB2P05538 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
HLA-DQB2P05538 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DQB2P05538 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DQB2P05538 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DQB2P05538 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DQB2P05538 AC004899.1-201ENST00000424687 1714 ntBASIC14.72□□□□□ -0.05
HLA-DQB2P05538 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DQB2P05538 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC14.72□□□□□ -0.05
HLA-DQB2P05538 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DQB2P05538 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DQB2P05538 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DQB2P05538 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC14.72□□□□□ -0.05
HLA-DQB2P05538 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 235.3 ms