Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.28□□□□□ -0.28
HMGN1P05114 AC133539.2-201ENST00000604757 467 ntBASIC13.28□□□□□ -0.28
HMGN1P05114 BX088702.1-201ENST00000610784 235 ntBASIC13.28□□□□□ -0.28
HMGN1P05114 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HMGN1P05114 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HMGN1P05114 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HMGN1P05114 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HMGN1P05114 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HMGN1P05114 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HMGN1P05114 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HMGN1P05114 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HMGN1P05114 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HMGN1P05114 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
HMGN1P05114 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HMGN1P05114 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HMGN1P05114 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HMGN1P05114 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
HMGN1P05114 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
HMGN1P05114 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC13.28□□□□□ -0.28
HMGN1P05114 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HMGN1P05114 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HMGN1P05114 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.28□□□□□ -0.28
HMGN1P05114 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HMGN1P05114 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
HMGN1P05114 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
HMGN1P05114 AC011700.1-201ENST00000610409 2627 ntBASIC13.27□□□□□ -0.28
HMGN1P05114 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
HMGN1P05114 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
HMGN1P05114 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
HMGN1P05114 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
HMGN1P05114 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
HMGN1P05114 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
HMGN1P05114 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
HMGN1P05114 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC13.27□□□□□ -0.28
HMGN1P05114 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.27□□□□□ -0.28
HMGN1P05114 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
HMGN1P05114 TP73-211ENST00000604074 4806 ntTSL 5 BASIC13.27□□□□□ -0.28
HMGN1P05114 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
HMGN1P05114 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC13.27□□□□□ -0.28
HMGN1P05114 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
HMGN1P05114 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
HMGN1P05114 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
HMGN1P05114 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.27□□□□□ -0.28
HMGN1P05114 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
HMGN1P05114 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
HMGN1P05114 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HMGN1P05114 AC111170.3-201ENST00000624282 2464 ntBASIC13.27□□□□□ -0.29
HMGN1P05114 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HMGN1P05114 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
HMGN1P05114 RN7SKP230-201ENST00000365642 335 ntBASIC13.27□□□□□ -0.29
HMGN1P05114 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HMGN1P05114 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC13.27□□□□□ -0.29
HMGN1P05114 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HMGN1P05114 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HMGN1P05114 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.27□□□□□ -0.29
HMGN1P05114 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC13.27□□□□□ -0.29
HMGN1P05114 AL359711.2-201ENST00000563105 872 ntBASIC13.27□□□□□ -0.29
HMGN1P05114 AC093726.1-201ENST00000608064 963 ntBASIC13.27□□□□□ -0.29
HMGN1P05114 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC13.27□□□□□ -0.29
HMGN1P05114 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
HMGN1P05114 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HMGN1P05114 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.27□□□□□ -0.29
HMGN1P05114 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HMGN1P05114 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC13.27□□□□□ -0.29
HMGN1P05114 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.27□□□□□ -0.29
HMGN1P05114 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.29
HMGN1P05114 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HMGN1P05114 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HMGN1P05114 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HMGN1P05114 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.27□□□□□ -0.29
HMGN1P05114 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
HMGN1P05114 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HMGN1P05114 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HMGN1P05114 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
HMGN1P05114 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
HMGN1P05114 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HMGN1P05114 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
HMGN1P05114 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HMGN1P05114 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC13.27□□□□□ -0.29
HMGN1P05114 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
HMGN1P05114 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
HMGN1P05114 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HMGN1P05114 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HMGN1P05114 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HMGN1P05114 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
HMGN1P05114 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HMGN1P05114 AC015909.5-201ENST00000624336 2266 ntBASIC13.27□□□□□ -0.29
HMGN1P05114 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
HMGN1P05114 AC099521.3-201ENST00000624251 2938 ntBASIC13.26□□□□□ -0.29
HMGN1P05114 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HMGN1P05114 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
HMGN1P05114 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HMGN1P05114 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
HMGN1P05114 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
HMGN1P05114 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.26□□□□□ -0.29
HMGN1P05114 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
HMGN1P05114 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HMGN1P05114 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC13.26□□□□□ -0.29
HMGN1P05114 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HMGN1P05114 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms