Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
GAPDHP04406 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
GAPDHP04406 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
GAPDHP04406 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC12.28□□□□□ -0.44
GAPDHP04406 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC12.28□□□□□ -0.44
GAPDHP04406 USE1-206ENST00000595101 1776 ntTSL 2 BASIC12.28□□□□□ -0.44
GAPDHP04406 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
GAPDHP04406 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
GAPDHP04406 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC12.28□□□□□ -0.44
GAPDHP04406 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
GAPDHP04406 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
GAPDHP04406 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
GAPDHP04406 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC12.27□□□□□ -0.44
GAPDHP04406 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
GAPDHP04406 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
GAPDHP04406 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
GAPDHP04406 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
GAPDHP04406 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
GAPDHP04406 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
GAPDHP04406 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.44
GAPDHP04406 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
GAPDHP04406 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
GAPDHP04406 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
GAPDHP04406 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
GAPDHP04406 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
GAPDHP04406 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC12.27□□□□□ -0.44
GAPDHP04406 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
GAPDHP04406 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
GAPDHP04406 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
GAPDHP04406 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
GAPDHP04406 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
GAPDHP04406 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
GAPDHP04406 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
GAPDHP04406 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
GAPDHP04406 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
GAPDHP04406 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
GAPDHP04406 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
GAPDHP04406 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC12.27□□□□□ -0.45
GAPDHP04406 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC12.27□□□□□ -0.45
GAPDHP04406 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
GAPDHP04406 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
GAPDHP04406 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
GAPDHP04406 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
GAPDHP04406 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
GAPDHP04406 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
GAPDHP04406 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC12.27□□□□□ -0.45
GAPDHP04406 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC12.27□□□□□ -0.45
GAPDHP04406 AC007389.4-201ENST00000454674 793 ntBASIC12.27□□□□□ -0.45
GAPDHP04406 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
GAPDHP04406 LHX6-205ENST00000464484 666 ntTSL 2 BASIC12.27□□□□□ -0.45
GAPDHP04406 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC12.27□□□□□ -0.45
GAPDHP04406 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC12.27□□□□□ -0.45
GAPDHP04406 DUX4L47-201ENST00000566374 394 ntBASIC12.27□□□□□ -0.45
GAPDHP04406 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
GAPDHP04406 AC010319.3-201ENST00000597028 470 ntBASIC12.27□□□□□ -0.45
GAPDHP04406 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC12.27□□□□□ -0.45
GAPDHP04406 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
GAPDHP04406 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
GAPDHP04406 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC12.27□□□□□ -0.45
GAPDHP04406 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC12.27□□□□□ -0.45
GAPDHP04406 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
GAPDHP04406 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
GAPDHP04406 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
GAPDHP04406 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC12.27□□□□□ -0.45
GAPDHP04406 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
GAPDHP04406 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
GAPDHP04406 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
GAPDHP04406 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
GAPDHP04406 FAM90A12P-201ENST00000519497 2375 ntBASIC12.27□□□□□ -0.45
GAPDHP04406 FAM90A24P-201ENST00000520792 2369 ntBASIC12.27□□□□□ -0.45
GAPDHP04406 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
GAPDHP04406 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
GAPDHP04406 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
GAPDHP04406 FUK-202ENST00000378912 3925 ntTSL 2 BASIC12.27□□□□□ -0.45
GAPDHP04406 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC12.27□□□□□ -0.45
GAPDHP04406 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC12.27□□□□□ -0.45
GAPDHP04406 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC12.27□□□□□ -0.45
GAPDHP04406 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC12.27□□□□□ -0.45
GAPDHP04406 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
GAPDHP04406 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
GAPDHP04406 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
GAPDHP04406 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
GAPDHP04406 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC12.26□□□□□ -0.45
GAPDHP04406 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
GAPDHP04406 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC12.26□□□□□ -0.45
GAPDHP04406 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
GAPDHP04406 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
GAPDHP04406 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
GAPDHP04406 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
GAPDHP04406 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC12.26□□□□□ -0.45
GAPDHP04406 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
GAPDHP04406 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
GAPDHP04406 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
GAPDHP04406 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
GAPDHP04406 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
GAPDHP04406 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
GAPDHP04406 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
GAPDHP04406 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
GAPDHP04406 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
GAPDHP04406 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms