Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 MIR3677-201ENST00000578964 60 ntBASIC14.17□□□□□ -0.14
TNFP01375 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC14.17□□□□□ -0.14
TNFP01375 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC14.17□□□□□ -0.14
TNFP01375 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
TNFP01375 AC051619.9-201ENST00000623237 597 ntBASIC14.17□□□□□ -0.14
TNFP01375 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC14.17□□□□□ -0.14
TNFP01375 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC14.17□□□□□ -0.14
TNFP01375 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TNFP01375 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TNFP01375 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TNFP01375 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TNFP01375 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.17□□□□□ -0.14
TNFP01375 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TNFP01375 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TNFP01375 LAP3P2-201ENST00000454686 1454 ntBASIC14.17□□□□□ -0.14
TNFP01375 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
TNFP01375 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TNFP01375 AP002414.2-201ENST00000591780 3365 ntBASIC14.17□□□□□ -0.14
TNFP01375 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.17□□□□□ -0.14
TNFP01375 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.17□□□□□ -0.14
TNFP01375 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TNFP01375 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TNFP01375 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TNFP01375 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC14.17□□□□□ -0.14
TNFP01375 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC14.17□□□□□ -0.14
TNFP01375 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TNFP01375 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
TNFP01375 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
TNFP01375 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TNFP01375 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
TNFP01375 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
TNFP01375 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.16□□□□□ -0.14
TNFP01375 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TNFP01375 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.16□□□□□ -0.14
TNFP01375 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
TNFP01375 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TNFP01375 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TNFP01375 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.16□□□□□ -0.14
TNFP01375 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.16□□□□□ -0.14
TNFP01375 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.16□□□□□ -0.14
TNFP01375 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC14.16□□□□□ -0.14
TNFP01375 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.16□□□□□ -0.14
TNFP01375 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TNFP01375 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
TNFP01375 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
TNFP01375 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TNFP01375 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TNFP01375 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TNFP01375 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TNFP01375 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TNFP01375 JTB-202ENST00000356648 1040 ntTSL 2 BASIC14.16□□□□□ -0.14
TNFP01375 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
TNFP01375 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
TNFP01375 MPV17-204ENST00000399052 749 ntTSL 4 BASIC14.16□□□□□ -0.14
TNFP01375 AC092580.1-201ENST00000433998 658 ntBASIC14.16□□□□□ -0.14
TNFP01375 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC14.16□□□□□ -0.14
TNFP01375 AL161932.2-201ENST00000435436 679 ntBASIC14.16□□□□□ -0.14
TNFP01375 FGFR3P1-201ENST00000449999 601 ntBASIC14.16□□□□□ -0.14
TNFP01375 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC14.16□□□□□ -0.14
TNFP01375 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC14.16□□□□□ -0.14
TNFP01375 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
TNFP01375 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
TNFP01375 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC14.16□□□□□ -0.14
TNFP01375 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.16□□□□□ -0.14
TNFP01375 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC14.16□□□□□ -0.14
TNFP01375 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
TNFP01375 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC14.16□□□□□ -0.14
TNFP01375 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC14.16□□□□□ -0.14
TNFP01375 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
TNFP01375 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TNFP01375 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
TNFP01375 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TNFP01375 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TNFP01375 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TNFP01375 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
TNFP01375 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
TNFP01375 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.16□□□□□ -0.14
TNFP01375 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TNFP01375 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TNFP01375 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC14.16□□□□□ -0.14
TNFP01375 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC14.16□□□□□ -0.14
TNFP01375 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14.16□□□□□ -0.14
TNFP01375 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
TNFP01375 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
TNFP01375 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TNFP01375 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TNFP01375 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TNFP01375 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TNFP01375 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
TNFP01375 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TNFP01375 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
TNFP01375 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TNFP01375 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
TNFP01375 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TNFP01375 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
TNFP01375 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
TNFP01375 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TNFP01375 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
TNFP01375 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TNFP01375 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms