Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LTN1O94822 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
LTN1O94822 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LTN1O94822 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LTN1O94822 AC020910.6-201ENST00000623084 1459 ntBASIC18.68■□□□□ 0.58
LTN1O94822 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LTN1O94822 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LTN1O94822 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LTN1O94822 HLA-DPA2-205ENST00000433582 733 ntBASIC18.68■□□□□ 0.58
LTN1O94822 ZNF877P-201ENST00000437614 612 ntBASIC18.68■□□□□ 0.58
LTN1O94822 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LTN1O94822 RN7SL128P-201ENST00000467883 305 ntBASIC18.68■□□□□ 0.58
LTN1O94822 FAM86KP-201ENST00000509817 987 ntBASIC18.68■□□□□ 0.58
LTN1O94822 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC18.68■□□□□ 0.58
LTN1O94822 BAP1-211ENST00000615113 489 ntBASIC18.68■□□□□ 0.58
LTN1O94822 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LTN1O94822 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
LTN1O94822 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LTN1O94822 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LTN1O94822 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LTN1O94822 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LTN1O94822 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC18.67■□□□□ 0.58
LTN1O94822 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LTN1O94822 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
LTN1O94822 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC18.67■□□□□ 0.58
LTN1O94822 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LTN1O94822 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LTN1O94822 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LTN1O94822 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LTN1O94822 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LTN1O94822 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
LTN1O94822 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
LTN1O94822 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LTN1O94822 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LTN1O94822 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC18.67■□□□□ 0.58
LTN1O94822 HLA-DMA-202ENST00000395303 1007 ntBASIC18.67■□□□□ 0.58
LTN1O94822 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC18.67■□□□□ 0.58
LTN1O94822 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC18.67■□□□□ 0.58
LTN1O94822 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC18.67■□□□□ 0.58
LTN1O94822 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC18.67■□□□□ 0.58
LTN1O94822 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
LTN1O94822 FAM187B2P-201ENST00000577135 713 ntBASIC18.67■□□□□ 0.58
LTN1O94822 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC18.67■□□□□ 0.58
LTN1O94822 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC18.67■□□□□ 0.58
LTN1O94822 AL139424.3-202ENST00000641619 917 ntBASIC18.67■□□□□ 0.58
LTN1O94822 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LTN1O94822 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC18.67■□□□□ 0.58
LTN1O94822 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
LTN1O94822 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LTN1O94822 PHB-210ENST00000511832 1509 ntTSL 2 BASIC18.67■□□□□ 0.58
LTN1O94822 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LTN1O94822 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC18.66■□□□□ 0.58
LTN1O94822 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
LTN1O94822 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
LTN1O94822 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LTN1O94822 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LTN1O94822 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LTN1O94822 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LTN1O94822 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LTN1O94822 AC136604.1-202ENST00000425471 771 ntBASIC18.66■□□□□ 0.58
LTN1O94822 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC18.66■□□□□ 0.58
LTN1O94822 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC18.66■□□□□ 0.58
LTN1O94822 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC18.66■□□□□ 0.58
LTN1O94822 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC18.66■□□□□ 0.58
LTN1O94822 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC18.66■□□□□ 0.58
LTN1O94822 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC18.66■□□□□ 0.58
LTN1O94822 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LTN1O94822 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LTN1O94822 AC097359.2-201ENST00000604992 2389 ntBASIC18.66■□□□□ 0.58
LTN1O94822 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LTN1O94822 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
LTN1O94822 AC144831.1-201ENST00000573312 2656 ntBASIC18.66■□□□□ 0.58
LTN1O94822 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
LTN1O94822 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LTN1O94822 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LTN1O94822 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC18.65■□□□□ 0.58
LTN1O94822 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LTN1O94822 IFNWP2-201ENST00000431203 580 ntBASIC18.65■□□□□ 0.58
LTN1O94822 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC18.65■□□□□ 0.58
LTN1O94822 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC18.65■□□□□ 0.58
LTN1O94822 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LTN1O94822 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC18.65■□□□□ 0.58
LTN1O94822 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC18.65■□□□□ 0.58
LTN1O94822 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC18.65■□□□□ 0.58
LTN1O94822 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC18.65■□□□□ 0.58
LTN1O94822 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC18.65■□□□□ 0.58
LTN1O94822 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC18.65■□□□□ 0.58
LTN1O94822 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC18.65■□□□□ 0.58
LTN1O94822 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC18.65■□□□□ 0.58
LTN1O94822 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LTN1O94822 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LTN1O94822 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC18.65■□□□□ 0.58
LTN1O94822 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LTN1O94822 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LTN1O94822 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC18.65■□□□□ 0.58
LTN1O94822 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LTN1O94822 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC18.65■□□□□ 0.58
LTN1O94822 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LTN1O94822 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LTN1O94822 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms