Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 AC026410.3-201ENST00000514280 936 ntBASIC11.46□□□□□ -0.57
ZNF253O75346 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC11.46□□□□□ -0.57
ZNF253O75346 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC11.46□□□□□ -0.57
ZNF253O75346 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC11.46□□□□□ -0.57
ZNF253O75346 MPI-209ENST00000564003 1195 ntTSL 2 BASIC11.46□□□□□ -0.57
ZNF253O75346 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
ZNF253O75346 AC036164.1-201ENST00000570544 333 ntBASIC11.46□□□□□ -0.57
ZNF253O75346 AC027612.4-201ENST00000605371 583 ntBASIC11.46□□□□□ -0.57
ZNF253O75346 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
ZNF253O75346 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC11.46□□□□□ -0.57
ZNF253O75346 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC11.46□□□□□ -0.57
ZNF253O75346 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
ZNF253O75346 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC11.46□□□□□ -0.57
ZNF253O75346 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
ZNF253O75346 AL157414.3-201ENST00000624276 1954 ntBASIC11.46□□□□□ -0.58
ZNF253O75346 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
ZNF253O75346 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
ZNF253O75346 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
ZNF253O75346 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
ZNF253O75346 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC11.46□□□□□ -0.58
ZNF253O75346 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC11.46□□□□□ -0.58
ZNF253O75346 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
ZNF253O75346 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC11.46□□□□□ -0.58
ZNF253O75346 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC11.46□□□□□ -0.58
ZNF253O75346 AL137783.1-201ENST00000623494 1896 ntBASIC11.46□□□□□ -0.58
ZNF253O75346 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC11.46□□□□□ -0.58
ZNF253O75346 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
ZNF253O75346 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC11.46□□□□□ -0.58
ZNF253O75346 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC11.46□□□□□ -0.58
ZNF253O75346 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
ZNF253O75346 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
ZNF253O75346 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
ZNF253O75346 AC020658.7-201ENST00000624274 2442 ntBASIC11.46□□□□□ -0.58
ZNF253O75346 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC11.46□□□□□ -0.58
ZNF253O75346 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
ZNF253O75346 PTPRVP-205ENST00000641549 5067 ntBASIC11.46□□□□□ -0.58
ZNF253O75346 AL138799.1-201ENST00000448213 1675 ntBASIC11.46□□□□□ -0.58
ZNF253O75346 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
ZNF253O75346 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC11.45□□□□□ -0.58
ZNF253O75346 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
ZNF253O75346 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
ZNF253O75346 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
ZNF253O75346 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
ZNF253O75346 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
ZNF253O75346 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
ZNF253O75346 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
ZNF253O75346 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
ZNF253O75346 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
ZNF253O75346 DRD5P1-201ENST00000456605 1438 ntBASIC11.45□□□□□ -0.58
ZNF253O75346 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
ZNF253O75346 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
ZNF253O75346 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC11.45□□□□□ -0.58
ZNF253O75346 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC11.45□□□□□ -0.58
ZNF253O75346 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
ZNF253O75346 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC11.45□□□□□ -0.58
ZNF253O75346 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
ZNF253O75346 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
ZNF253O75346 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
ZNF253O75346 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
ZNF253O75346 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
ZNF253O75346 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC11.45□□□□□ -0.58
ZNF253O75346 AC107890.1-201ENST00000422478 521 ntBASIC11.45□□□□□ -0.58
ZNF253O75346 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC11.45□□□□□ -0.58
ZNF253O75346 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC11.45□□□□□ -0.58
ZNF253O75346 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
ZNF253O75346 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
ZNF253O75346 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC11.45□□□□□ -0.58
ZNF253O75346 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
ZNF253O75346 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC11.45□□□□□ -0.58
ZNF253O75346 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
ZNF253O75346 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC11.45□□□□□ -0.58
ZNF253O75346 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC11.45□□□□□ -0.58
ZNF253O75346 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
ZNF253O75346 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC11.45□□□□□ -0.58
ZNF253O75346 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC11.45□□□□□ -0.58
ZNF253O75346 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
ZNF253O75346 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
ZNF253O75346 AC093813.1-201ENST00000605066 256 ntBASIC11.45□□□□□ -0.58
ZNF253O75346 Z92544.3-201ENST00000624747 417 ntBASIC11.45□□□□□ -0.58
ZNF253O75346 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC11.45□□□□□ -0.58
ZNF253O75346 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
ZNF253O75346 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
ZNF253O75346 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
ZNF253O75346 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
ZNF253O75346 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
ZNF253O75346 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
ZNF253O75346 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
ZNF253O75346 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
ZNF253O75346 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
ZNF253O75346 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
ZNF253O75346 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC11.45□□□□□ -0.58
ZNF253O75346 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC11.45□□□□□ -0.58
ZNF253O75346 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
ZNF253O75346 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC11.45□□□□□ -0.58
ZNF253O75346 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
ZNF253O75346 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
ZNF253O75346 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
ZNF253O75346 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
ZNF253O75346 MX1-218ENST00000619682 1980 ntTSL 5 BASIC11.45□□□□□ -0.58
ZNF253O75346 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms