Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ZIC3O60481 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ZIC3O60481 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
ZIC3O60481 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
ZIC3O60481 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ZIC3O60481 AC007191.1-201ENST00000623179 2995 ntBASIC13.06□□□□□ -0.32
ZIC3O60481 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
ZIC3O60481 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ZIC3O60481 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ZIC3O60481 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
ZIC3O60481 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.06□□□□□ -0.32
ZIC3O60481 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC13.06□□□□□ -0.32
ZIC3O60481 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ZIC3O60481 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ZIC3O60481 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ZIC3O60481 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
ZIC3O60481 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ZIC3O60481 LINC01165-201ENST00000445190 1623 ntBASIC13.06□□□□□ -0.32
ZIC3O60481 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ZIC3O60481 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ZIC3O60481 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
ZIC3O60481 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.05□□□□□ -0.32
ZIC3O60481 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
ZIC3O60481 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
ZIC3O60481 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
ZIC3O60481 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ZIC3O60481 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.05□□□□□ -0.32
ZIC3O60481 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ZIC3O60481 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ZIC3O60481 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
ZIC3O60481 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ZIC3O60481 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ZIC3O60481 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ZIC3O60481 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.05□□□□□ -0.32
ZIC3O60481 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
ZIC3O60481 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
ZIC3O60481 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
ZIC3O60481 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
ZIC3O60481 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
ZIC3O60481 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
ZIC3O60481 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
ZIC3O60481 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ZIC3O60481 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
ZIC3O60481 ISCA2P1-201ENST00000425548 448 ntBASIC13.05□□□□□ -0.32
ZIC3O60481 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
ZIC3O60481 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC13.05□□□□□ -0.32
ZIC3O60481 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC13.05□□□□□ -0.32
ZIC3O60481 AC012618.1-201ENST00000461223 412 ntBASIC13.05□□□□□ -0.32
ZIC3O60481 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ZIC3O60481 AC024681.1-201ENST00000521917 487 ntBASIC13.05□□□□□ -0.32
ZIC3O60481 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.05□□□□□ -0.32
ZIC3O60481 AL161670.2-201ENST00000557650 1227 ntBASIC13.05□□□□□ -0.32
ZIC3O60481 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC13.05□□□□□ -0.32
ZIC3O60481 AC140658.4-201ENST00000561990 352 ntBASIC13.05□□□□□ -0.32
ZIC3O60481 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
ZIC3O60481 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC13.05□□□□□ -0.32
ZIC3O60481 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC13.05□□□□□ -0.32
ZIC3O60481 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
ZIC3O60481 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC13.05□□□□□ -0.32
ZIC3O60481 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
ZIC3O60481 AP001505.2-201ENST00000616815 443 ntBASIC13.05□□□□□ -0.32
ZIC3O60481 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC13.05□□□□□ -0.32
ZIC3O60481 AC138627.1-207ENST00000641560 1006 ntBASIC13.05□□□□□ -0.32
ZIC3O60481 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
ZIC3O60481 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ZIC3O60481 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.05□□□□□ -0.32
ZIC3O60481 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.05□□□□□ -0.32
ZIC3O60481 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC13.05□□□□□ -0.32
ZIC3O60481 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
ZIC3O60481 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
ZIC3O60481 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ZIC3O60481 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ZIC3O60481 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
ZIC3O60481 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC13.05□□□□□ -0.32
ZIC3O60481 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC13.05□□□□□ -0.32
ZIC3O60481 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ZIC3O60481 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
ZIC3O60481 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
ZIC3O60481 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC13.05□□□□□ -0.32
ZIC3O60481 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ZIC3O60481 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
ZIC3O60481 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ZIC3O60481 MIR600HG-201ENST00000449175 5984 ntBASIC13.04□□□□□ -0.32
ZIC3O60481 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC13.04□□□□□ -0.32
ZIC3O60481 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ZIC3O60481 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ZIC3O60481 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.04□□□□□ -0.32
ZIC3O60481 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
ZIC3O60481 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ZIC3O60481 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.04□□□□□ -0.32
ZIC3O60481 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
ZIC3O60481 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.04□□□□□ -0.32
ZIC3O60481 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
ZIC3O60481 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.04□□□□□ -0.32
ZIC3O60481 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
ZIC3O60481 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ZIC3O60481 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
ZIC3O60481 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ZIC3O60481 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ZIC3O60481 NCR3-202ENST00000376071 541 ntTSL 5 BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms