Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
SNAI2O43623 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SNAI2O43623 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC11□□□□□ -0.65
SNAI2O43623 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SNAI2O43623 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
SNAI2O43623 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SNAI2O43623 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SNAI2O43623 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC11□□□□□ -0.65
SNAI2O43623 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
SNAI2O43623 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC11□□□□□ -0.65
SNAI2O43623 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC11□□□□□ -0.65
SNAI2O43623 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC11□□□□□ -0.65
SNAI2O43623 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC11□□□□□ -0.65
SNAI2O43623 FDX1P1-201ENST00000449115 551 ntBASIC11□□□□□ -0.65
SNAI2O43623 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC11□□□□□ -0.65
SNAI2O43623 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC11□□□□□ -0.65
SNAI2O43623 HLA-V-204ENST00000476601 1289 ntBASIC11□□□□□ -0.65
SNAI2O43623 RN7SL618P-201ENST00000477850 296 ntBASIC11□□□□□ -0.65
SNAI2O43623 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC11□□□□□ -0.65
SNAI2O43623 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC11□□□□□ -0.65
SNAI2O43623 SDHAP3-202ENST00000515467 728 ntBASIC11□□□□□ -0.65
SNAI2O43623 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC11□□□□□ -0.65
SNAI2O43623 CCND1-203ENST00000536559 553 ntTSL 3 BASIC11□□□□□ -0.65
SNAI2O43623 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC11□□□□□ -0.65
SNAI2O43623 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SNAI2O43623 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC11□□□□□ -0.65
SNAI2O43623 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC11□□□□□ -0.65
SNAI2O43623 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SNAI2O43623 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC11□□□□□ -0.65
SNAI2O43623 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC11□□□□□ -0.65
SNAI2O43623 FLT4-212ENST00000619105 3806 ntTSL 5 BASIC11□□□□□ -0.65
SNAI2O43623 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC11□□□□□ -0.65
SNAI2O43623 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
SNAI2O43623 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
SNAI2O43623 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
SNAI2O43623 PRICKLE1-203ENST00000455697 4277 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
SNAI2O43623 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC11□□□□□ -0.65
SNAI2O43623 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SNAI2O43623 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC11□□□□□ -0.65
SNAI2O43623 AC022400.8-201ENST00000623453 3599 ntBASIC11□□□□□ -0.65
SNAI2O43623 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC11□□□□□ -0.65
SNAI2O43623 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC11□□□□□ -0.65
SNAI2O43623 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC11□□□□□ -0.65
SNAI2O43623 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SNAI2O43623 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
SNAI2O43623 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
SNAI2O43623 SYNRG-229ENST00000621136 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
SNAI2O43623 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC11□□□□□ -0.65
SNAI2O43623 VAX1-201ENST00000277905 4494 ntTSL 1 (best) BASIC11□□□□□ -0.65
SNAI2O43623 SCN1B-202ENST00000415950 4537 ntTSL 1 (best) BASIC11□□□□□ -0.65
SNAI2O43623 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
SNAI2O43623 HADH-202ENST00000403312 1752 ntTSL 5 BASIC11□□□□□ -0.65
SNAI2O43623 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
SNAI2O43623 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SNAI2O43623 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC11□□□□□ -0.65
SNAI2O43623 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC11□□□□□ -0.65
SNAI2O43623 DUSP10-201ENST00000366899 2676 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SNAI2O43623 API5-203ENST00000455725 2257 ntTSL 2 BASIC11□□□□□ -0.65
SNAI2O43623 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
SNAI2O43623 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC11□□□□□ -0.65
SNAI2O43623 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC11□□□□□ -0.65
SNAI2O43623 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC11□□□□□ -0.65
SNAI2O43623 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC11□□□□□ -0.65
SNAI2O43623 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SNAI2O43623 AC015818.8-201ENST00000587907 1519 ntBASIC10.99□□□□□ -0.65
SNAI2O43623 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
SNAI2O43623 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC10.99□□□□□ -0.65
SNAI2O43623 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
SNAI2O43623 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SNAI2O43623 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SNAI2O43623 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
SNAI2O43623 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
SNAI2O43623 ATXN2L-201ENST00000325215 3788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
SNAI2O43623 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SNAI2O43623 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC10.99□□□□□ -0.65
SNAI2O43623 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
SNAI2O43623 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
SNAI2O43623 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC10.99□□□□□ -0.65
SNAI2O43623 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
SNAI2O43623 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
SNAI2O43623 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
SNAI2O43623 PIM1-201ENST00000373509 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SNAI2O43623 MRVI1-201ENST00000423302 6126 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
SNAI2O43623 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SNAI2O43623 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC10.99□□□□□ -0.65
SNAI2O43623 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC10.99□□□□□ -0.65
SNAI2O43623 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SNAI2O43623 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SNAI2O43623 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC10.99□□□□□ -0.65
SNAI2O43623 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SNAI2O43623 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC10.99□□□□□ -0.65
SNAI2O43623 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
SNAI2O43623 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC10.99□□□□□ -0.65
SNAI2O43623 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
SNAI2O43623 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC10.99□□□□□ -0.65
SNAI2O43623 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
SNAI2O43623 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
SNAI2O43623 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC10.99□□□□□ -0.65
SNAI2O43623 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC10.99□□□□□ -0.65
SNAI2O43623 AC010336.2-201ENST00000564226 506 ntBASIC10.99□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms