Protein–RNA interactions for Protein: B2RNN3

C1QTNF9B, Complement C1q and tumor necrosis factor-related protein 9B, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF9BB2RNN3 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
C1QTNF9BB2RNN3 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC13.55□□□□□ -0.24
C1QTNF9BB2RNN3 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
C1QTNF9BB2RNN3 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC13.54□□□□□ -0.24
C1QTNF9BB2RNN3 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
C1QTNF9BB2RNN3 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
C1QTNF9BB2RNN3 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
C1QTNF9BB2RNN3 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC13.54□□□□□ -0.24
C1QTNF9BB2RNN3 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
C1QTNF9BB2RNN3 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
C1QTNF9BB2RNN3 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
C1QTNF9BB2RNN3 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
C1QTNF9BB2RNN3 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
C1QTNF9BB2RNN3 DBET-201ENST00000630918 3363 ntBASIC13.54□□□□□ -0.24
C1QTNF9BB2RNN3 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
C1QTNF9BB2RNN3 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
C1QTNF9BB2RNN3 GPN3-203ENST00000543199 1604 ntTSL 5 BASIC13.54□□□□□ -0.24
C1QTNF9BB2RNN3 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
C1QTNF9BB2RNN3 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC13.54□□□□□ -0.24
C1QTNF9BB2RNN3 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
C1QTNF9BB2RNN3 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC13.54□□□□□ -0.24
C1QTNF9BB2RNN3 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
C1QTNF9BB2RNN3 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
C1QTNF9BB2RNN3 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
C1QTNF9BB2RNN3 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
C1QTNF9BB2RNN3 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
C1QTNF9BB2RNN3 OR10N1P-201ENST00000392758 869 ntBASIC13.54□□□□□ -0.24
C1QTNF9BB2RNN3 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC13.54□□□□□ -0.24
C1QTNF9BB2RNN3 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
C1QTNF9BB2RNN3 AL137244.1-201ENST00000422931 865 ntBASIC13.54□□□□□ -0.24
C1QTNF9BB2RNN3 ALG1L15P-201ENST00000482834 794 ntBASIC13.54□□□□□ -0.24
C1QTNF9BB2RNN3 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC13.54□□□□□ -0.24
C1QTNF9BB2RNN3 ACY3-202ENST00000529256 933 ntTSL 3 BASIC13.54□□□□□ -0.24
C1QTNF9BB2RNN3 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC13.54□□□□□ -0.24
C1QTNF9BB2RNN3 AC004801.1-201ENST00000549557 360 ntBASIC13.54□□□□□ -0.24
C1QTNF9BB2RNN3 KRT8P2-201ENST00000556193 944 ntBASIC13.54□□□□□ -0.24
C1QTNF9BB2RNN3 HNRNPA1P5-201ENST00000558213 966 ntBASIC13.54□□□□□ -0.24
C1QTNF9BB2RNN3 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC13.54□□□□□ -0.24
C1QTNF9BB2RNN3 ANKRD26P1-203ENST00000569528 966 ntBASIC13.54□□□□□ -0.24
C1QTNF9BB2RNN3 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC13.54□□□□□ -0.24
C1QTNF9BB2RNN3 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC13.54□□□□□ -0.24
C1QTNF9BB2RNN3 CSTP2-201ENST00000610599 398 ntBASIC13.54□□□□□ -0.24
C1QTNF9BB2RNN3 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC13.54□□□□□ -0.24
C1QTNF9BB2RNN3 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
C1QTNF9BB2RNN3 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
C1QTNF9BB2RNN3 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
C1QTNF9BB2RNN3 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
C1QTNF9BB2RNN3 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
C1QTNF9BB2RNN3 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
C1QTNF9BB2RNN3 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.54□□□□□ -0.24
C1QTNF9BB2RNN3 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
C1QTNF9BB2RNN3 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
C1QTNF9BB2RNN3 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
C1QTNF9BB2RNN3 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
C1QTNF9BB2RNN3 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
C1QTNF9BB2RNN3 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
C1QTNF9BB2RNN3 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
C1QTNF9BB2RNN3 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
C1QTNF9BB2RNN3 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.53□□□□□ -0.24
C1QTNF9BB2RNN3 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
C1QTNF9BB2RNN3 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC13.53□□□□□ -0.24
C1QTNF9BB2RNN3 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
C1QTNF9BB2RNN3 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
C1QTNF9BB2RNN3 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
C1QTNF9BB2RNN3 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
C1QTNF9BB2RNN3 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
C1QTNF9BB2RNN3 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
C1QTNF9BB2RNN3 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
C1QTNF9BB2RNN3 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
C1QTNF9BB2RNN3 REXO1L4P-201ENST00000605109 1937 ntBASIC13.53□□□□□ -0.24
C1QTNF9BB2RNN3 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
C1QTNF9BB2RNN3 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
C1QTNF9BB2RNN3 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
C1QTNF9BB2RNN3 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
C1QTNF9BB2RNN3 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
C1QTNF9BB2RNN3 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC13.53□□□□□ -0.24
C1QTNF9BB2RNN3 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
C1QTNF9BB2RNN3 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.53□□□□□ -0.24
C1QTNF9BB2RNN3 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC13.53□□□□□ -0.24
C1QTNF9BB2RNN3 GALP-202ENST00000440823 889 ntTSL 5 BASIC13.53□□□□□ -0.24
C1QTNF9BB2RNN3 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC13.53□□□□□ -0.24
C1QTNF9BB2RNN3 RN7SL767P-201ENST00000493013 295 ntBASIC13.53□□□□□ -0.24
C1QTNF9BB2RNN3 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC13.53□□□□□ -0.24
C1QTNF9BB2RNN3 AL513165.2-203ENST00000537239 717 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
C1QTNF9BB2RNN3 MYL6-215ENST00000549566 685 ntTSL 2 BASIC13.53□□□□□ -0.24
C1QTNF9BB2RNN3 SNRPF-205ENST00000553192 552 ntTSL 4 BASIC13.53□□□□□ -0.24
C1QTNF9BB2RNN3 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.53□□□□□ -0.24
C1QTNF9BB2RNN3 ACTBP9-201ENST00000587663 1099 ntBASIC13.53□□□□□ -0.24
C1QTNF9BB2RNN3 TYMSP2-201ENST00000589501 424 ntBASIC13.53□□□□□ -0.24
C1QTNF9BB2RNN3 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC13.53□□□□□ -0.24
C1QTNF9BB2RNN3 PRKACA-208ENST00000589994 1127 ntTSL 2 BASIC13.53□□□□□ -0.24
C1QTNF9BB2RNN3 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC13.53□□□□□ -0.24
C1QTNF9BB2RNN3 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC13.53□□□□□ -0.24
C1QTNF9BB2RNN3 AL499606.1-201ENST00000627866 413 ntTSL 3 BASIC13.53□□□□□ -0.24
C1QTNF9BB2RNN3 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.53□□□□□ -0.24
C1QTNF9BB2RNN3 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
C1QTNF9BB2RNN3 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
C1QTNF9BB2RNN3 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC13.53□□□□□ -0.24
C1QTNF9BB2RNN3 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
C1QTNF9BB2RNN3 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms