Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM235A6NFC5 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC12.51□□□□□ -0.41
TMEM235A6NFC5 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC12.51□□□□□ -0.41
TMEM235A6NFC5 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC12.51□□□□□ -0.41
TMEM235A6NFC5 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC12.51□□□□□ -0.41
TMEM235A6NFC5 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM235A6NFC5 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM235A6NFC5 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC12.51□□□□□ -0.41
TMEM235A6NFC5 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM235A6NFC5 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM235A6NFC5 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM235A6NFC5 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM235A6NFC5 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC12.51□□□□□ -0.41
TMEM235A6NFC5 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC12.51□□□□□ -0.41
TMEM235A6NFC5 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM235A6NFC5 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM235A6NFC5 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM235A6NFC5 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM235A6NFC5 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM235A6NFC5 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
TMEM235A6NFC5 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM235A6NFC5 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM235A6NFC5 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM235A6NFC5 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM235A6NFC5 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM235A6NFC5 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM235A6NFC5 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM235A6NFC5 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC12.51□□□□□ -0.41
TMEM235A6NFC5 AC107890.1-201ENST00000422478 521 ntBASIC12.51□□□□□ -0.41
TMEM235A6NFC5 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC12.51□□□□□ -0.41
TMEM235A6NFC5 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC12.51□□□□□ -0.41
TMEM235A6NFC5 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
TMEM235A6NFC5 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM235A6NFC5 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC12.51□□□□□ -0.41
TMEM235A6NFC5 RPL13AP25-201ENST00000484130 612 ntBASIC12.51□□□□□ -0.41
TMEM235A6NFC5 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC12.51□□□□□ -0.41
TMEM235A6NFC5 FTH1-202ENST00000526640 786 ntTSL 2 BASIC12.51□□□□□ -0.41
TMEM235A6NFC5 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
TMEM235A6NFC5 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC12.51□□□□□ -0.41
TMEM235A6NFC5 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM235A6NFC5 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC12.51□□□□□ -0.41
TMEM235A6NFC5 AC140878.1-201ENST00000565277 250 ntBASIC12.51□□□□□ -0.41
TMEM235A6NFC5 SPDYE22P-201ENST00000582158 798 ntBASIC12.51□□□□□ -0.41
TMEM235A6NFC5 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC12.51□□□□□ -0.41
TMEM235A6NFC5 SRD5A3P1-201ENST00000603021 949 ntBASIC12.51□□□□□ -0.41
TMEM235A6NFC5 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
TMEM235A6NFC5 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM235A6NFC5 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC12.51□□□□□ -0.41
TMEM235A6NFC5 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM235A6NFC5 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
TMEM235A6NFC5 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM235A6NFC5 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM235A6NFC5 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
TMEM235A6NFC5 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM235A6NFC5 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC12.51□□□□□ -0.41
TMEM235A6NFC5 BTBD7P1-201ENST00000447253 1453 ntBASIC12.51□□□□□ -0.41
TMEM235A6NFC5 STK3-218ENST00000617590 2485 ntTSL 5 BASIC12.51□□□□□ -0.41
TMEM235A6NFC5 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
TMEM235A6NFC5 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM235A6NFC5 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM235A6NFC5 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
TMEM235A6NFC5 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC12.51□□□□□ -0.41
TMEM235A6NFC5 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
TMEM235A6NFC5 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM235A6NFC5 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC12.51□□□□□ -0.41
TMEM235A6NFC5 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM235A6NFC5 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM235A6NFC5 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM235A6NFC5 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM235A6NFC5 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM235A6NFC5 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC12.51□□□□□ -0.41
TMEM235A6NFC5 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
TMEM235A6NFC5 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC12.51□□□□□ -0.41
TMEM235A6NFC5 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC12.51□□□□□ -0.41
TMEM235A6NFC5 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM235A6NFC5 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM235A6NFC5 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
TMEM235A6NFC5 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM235A6NFC5 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC12.5□□□□□ -0.41
TMEM235A6NFC5 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM235A6NFC5 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM235A6NFC5 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM235A6NFC5 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM235A6NFC5 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM235A6NFC5 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM235A6NFC5 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC12.5□□□□□ -0.41
TMEM235A6NFC5 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC12.5□□□□□ -0.41
TMEM235A6NFC5 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM235A6NFC5 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
TMEM235A6NFC5 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC12.5□□□□□ -0.41
TMEM235A6NFC5 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM235A6NFC5 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
TMEM235A6NFC5 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
TMEM235A6NFC5 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM235A6NFC5 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
TMEM235A6NFC5 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM235A6NFC5 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
TMEM235A6NFC5 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM235A6NFC5 RPS15-201ENST00000233609 534 ntTSL 2 BASIC12.5□□□□□ -0.41
TMEM235A6NFC5 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 391 ms