Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TBC1D3FA6NER0 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
TBC1D3FA6NER0 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.49□□□□□ -0.09
TBC1D3FA6NER0 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
TBC1D3FA6NER0 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TBC1D3FA6NER0 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TBC1D3FA6NER0 BANF1P3-201ENST00000412556 261 ntBASIC14.49□□□□□ -0.09
TBC1D3FA6NER0 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.49□□□□□ -0.09
TBC1D3FA6NER0 AC069218.1-201ENST00000435269 762 ntBASIC14.49□□□□□ -0.09
TBC1D3FA6NER0 ST13P19-201ENST00000442505 1124 ntBASIC14.49□□□□□ -0.09
TBC1D3FA6NER0 RN7SL530P-201ENST00000485097 298 ntBASIC14.49□□□□□ -0.09
TBC1D3FA6NER0 LY6E-208ENST00000520531 490 ntTSL 2 BASIC14.49□□□□□ -0.09
TBC1D3FA6NER0 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC14.49□□□□□ -0.09
TBC1D3FA6NER0 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC14.49□□□□□ -0.09
TBC1D3FA6NER0 PHBP15-201ENST00000574228 665 ntBASIC14.49□□□□□ -0.09
TBC1D3FA6NER0 HPN-206ENST00000597419 1212 ntTSL 5 BASIC14.49□□□□□ -0.09
TBC1D3FA6NER0 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC14.49□□□□□ -0.09
TBC1D3FA6NER0 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TBC1D3FA6NER0 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.49□□□□□ -0.09
TBC1D3FA6NER0 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TBC1D3FA6NER0 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TBC1D3FA6NER0 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
TBC1D3FA6NER0 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TBC1D3FA6NER0 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
TBC1D3FA6NER0 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TBC1D3FA6NER0 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.49□□□□□ -0.09
TBC1D3FA6NER0 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TBC1D3FA6NER0 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.49□□□□□ -0.09
TBC1D3FA6NER0 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
TBC1D3FA6NER0 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.49□□□□□ -0.09
TBC1D3FA6NER0 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC14.49□□□□□ -0.09
TBC1D3FA6NER0 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TBC1D3FA6NER0 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.49□□□□□ -0.09
TBC1D3FA6NER0 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TBC1D3FA6NER0 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC14.48□□□□□ -0.09
TBC1D3FA6NER0 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TBC1D3FA6NER0 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.48□□□□□ -0.09
TBC1D3FA6NER0 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TBC1D3FA6NER0 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TBC1D3FA6NER0 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TBC1D3FA6NER0 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.48□□□□□ -0.09
TBC1D3FA6NER0 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
TBC1D3FA6NER0 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.48□□□□□ -0.09
TBC1D3FA6NER0 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
TBC1D3FA6NER0 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
TBC1D3FA6NER0 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.48□□□□□ -0.09
TBC1D3FA6NER0 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TBC1D3FA6NER0 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TBC1D3FA6NER0 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TBC1D3FA6NER0 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.48□□□□□ -0.09
TBC1D3FA6NER0 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TBC1D3FA6NER0 AL583805.1-201ENST00000391389 531 ntBASIC14.48□□□□□ -0.09
TBC1D3FA6NER0 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC14.48□□□□□ -0.09
TBC1D3FA6NER0 NOC2LP1-201ENST00000450578 752 ntBASIC14.48□□□□□ -0.09
TBC1D3FA6NER0 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TBC1D3FA6NER0 DUX4L50-201ENST00000455245 715 ntBASIC14.48□□□□□ -0.09
TBC1D3FA6NER0 AP000358.1-201ENST00000456260 156 ntBASIC14.48□□□□□ -0.09
TBC1D3FA6NER0 RHEB-207ENST00000496004 744 ntTSL 2 BASIC14.48□□□□□ -0.09
TBC1D3FA6NER0 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TBC1D3FA6NER0 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
TBC1D3FA6NER0 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC14.48□□□□□ -0.09
TBC1D3FA6NER0 AC027237.1-201ENST00000560942 655 ntBASIC14.48□□□□□ -0.09
TBC1D3FA6NER0 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC14.48□□□□□ -0.09
TBC1D3FA6NER0 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
TBC1D3FA6NER0 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC14.48□□□□□ -0.09
TBC1D3FA6NER0 AC051619.9-201ENST00000623237 597 ntBASIC14.48□□□□□ -0.09
TBC1D3FA6NER0 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC14.48□□□□□ -0.09
TBC1D3FA6NER0 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
TBC1D3FA6NER0 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TBC1D3FA6NER0 AC067750.1-201ENST00000608826 6545 ntBASIC14.48□□□□□ -0.09
TBC1D3FA6NER0 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
TBC1D3FA6NER0 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
TBC1D3FA6NER0 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
TBC1D3FA6NER0 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.48□□□□□ -0.09
TBC1D3FA6NER0 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TBC1D3FA6NER0 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TBC1D3FA6NER0 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
TBC1D3FA6NER0 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.48□□□□□ -0.09
TBC1D3FA6NER0 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TBC1D3FA6NER0 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.48□□□□□ -0.09
TBC1D3FA6NER0 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
TBC1D3FA6NER0 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TBC1D3FA6NER0 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TBC1D3FA6NER0 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TBC1D3FA6NER0 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TBC1D3FA6NER0 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TBC1D3FA6NER0 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.47□□□□□ -0.09
TBC1D3FA6NER0 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
TBC1D3FA6NER0 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TBC1D3FA6NER0 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC14.47□□□□□ -0.09
TBC1D3FA6NER0 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.47□□□□□ -0.09
TBC1D3FA6NER0 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TBC1D3FA6NER0 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TBC1D3FA6NER0 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.47□□□□□ -0.09
TBC1D3FA6NER0 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TBC1D3FA6NER0 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TBC1D3FA6NER0 CTBP1-AS2-206ENST00000581398 5652 ntBASIC14.47□□□□□ -0.09
TBC1D3FA6NER0 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TBC1D3FA6NER0 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TBC1D3FA6NER0 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms