Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC15.73■□□□□ 0.11
SSX2IPQ9Y2D8 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC15.73■□□□□ 0.11
SSX2IPQ9Y2D8 GCOM2-201ENST00000509133 1104 ntBASIC15.73■□□□□ 0.11
SSX2IPQ9Y2D8 AC242376.1-201ENST00000559033 726 ntBASIC15.73■□□□□ 0.11
SSX2IPQ9Y2D8 AC103988.2-201ENST00000561804 725 ntBASIC15.73■□□□□ 0.11
SSX2IPQ9Y2D8 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC15.73■□□□□ 0.11
SSX2IPQ9Y2D8 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC15.73■□□□□ 0.11
SSX2IPQ9Y2D8 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SSX2IPQ9Y2D8 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC15.73■□□□□ 0.11
SSX2IPQ9Y2D8 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SSX2IPQ9Y2D8 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
SSX2IPQ9Y2D8 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC15.73■□□□□ 0.11
SSX2IPQ9Y2D8 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
SSX2IPQ9Y2D8 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC15.73■□□□□ 0.11
SSX2IPQ9Y2D8 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC15.73■□□□□ 0.11
SSX2IPQ9Y2D8 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SSX2IPQ9Y2D8 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SSX2IPQ9Y2D8 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SSX2IPQ9Y2D8 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SSX2IPQ9Y2D8 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SSX2IPQ9Y2D8 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SSX2IPQ9Y2D8 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.73■□□□□ 0.11
SSX2IPQ9Y2D8 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
SSX2IPQ9Y2D8 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
SSX2IPQ9Y2D8 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SSX2IPQ9Y2D8 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
SSX2IPQ9Y2D8 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
SSX2IPQ9Y2D8 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SSX2IPQ9Y2D8 AC106881.1-201ENST00000605849 3329 ntBASIC15.73■□□□□ 0.11
SSX2IPQ9Y2D8 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SSX2IPQ9Y2D8 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SSX2IPQ9Y2D8 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SSX2IPQ9Y2D8 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
SSX2IPQ9Y2D8 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC15.72■□□□□ 0.11
SSX2IPQ9Y2D8 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SSX2IPQ9Y2D8 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SSX2IPQ9Y2D8 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SSX2IPQ9Y2D8 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SSX2IPQ9Y2D8 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SSX2IPQ9Y2D8 MROH4P-201ENST00000431302 1578 ntBASIC15.72■□□□□ 0.11
SSX2IPQ9Y2D8 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SSX2IPQ9Y2D8 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SSX2IPQ9Y2D8 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SSX2IPQ9Y2D8 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SSX2IPQ9Y2D8 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC15.72■□□□□ 0.11
SSX2IPQ9Y2D8 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SSX2IPQ9Y2D8 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SSX2IPQ9Y2D8 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC15.72■□□□□ 0.11
SSX2IPQ9Y2D8 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SSX2IPQ9Y2D8 RN7SL258P-201ENST00000478664 300 ntBASIC15.72■□□□□ 0.11
SSX2IPQ9Y2D8 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC15.72■□□□□ 0.11
SSX2IPQ9Y2D8 AC019193.1-201ENST00000506678 823 ntBASIC15.72■□□□□ 0.11
SSX2IPQ9Y2D8 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC15.72■□□□□ 0.11
SSX2IPQ9Y2D8 AC131206.1-201ENST00000538078 1211 ntBASIC15.72■□□□□ 0.11
SSX2IPQ9Y2D8 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC15.72■□□□□ 0.11
SSX2IPQ9Y2D8 AF254983.2-201ENST00000612331 135 ntBASIC15.72■□□□□ 0.11
SSX2IPQ9Y2D8 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC15.72■□□□□ 0.11
SSX2IPQ9Y2D8 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SSX2IPQ9Y2D8 SNX1-214ENST00000625244 324 ntTSL 5 BASIC15.72■□□□□ 0.11
SSX2IPQ9Y2D8 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SSX2IPQ9Y2D8 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SSX2IPQ9Y2D8 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SSX2IPQ9Y2D8 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.72■□□□□ 0.11
SSX2IPQ9Y2D8 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.72■□□□□ 0.11
SSX2IPQ9Y2D8 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SSX2IPQ9Y2D8 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
SSX2IPQ9Y2D8 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SSX2IPQ9Y2D8 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SSX2IPQ9Y2D8 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SSX2IPQ9Y2D8 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SSX2IPQ9Y2D8 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
SSX2IPQ9Y2D8 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SSX2IPQ9Y2D8 KRT8P21-201ENST00000430398 1491 ntBASIC15.71■□□□□ 0.11
SSX2IPQ9Y2D8 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SSX2IPQ9Y2D8 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SSX2IPQ9Y2D8 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SSX2IPQ9Y2D8 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SSX2IPQ9Y2D8 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SSX2IPQ9Y2D8 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SSX2IPQ9Y2D8 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SSX2IPQ9Y2D8 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
SSX2IPQ9Y2D8 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.71■□□□□ 0.11
SSX2IPQ9Y2D8 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
SSX2IPQ9Y2D8 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.71■□□□□ 0.11
SSX2IPQ9Y2D8 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC15.71■□□□□ 0.11
SSX2IPQ9Y2D8 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC15.71■□□□□ 0.11
SSX2IPQ9Y2D8 AL359258.3-201ENST00000622910 2331 ntBASIC15.71■□□□□ 0.11
SSX2IPQ9Y2D8 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC15.71■□□□□ 0.11
SSX2IPQ9Y2D8 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SSX2IPQ9Y2D8 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.71■□□□□ 0.11
SSX2IPQ9Y2D8 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SSX2IPQ9Y2D8 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SSX2IPQ9Y2D8 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SSX2IPQ9Y2D8 AC026316.1-201ENST00000398900 414 ntBASIC15.71■□□□□ 0.11
SSX2IPQ9Y2D8 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SSX2IPQ9Y2D8 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC15.71■□□□□ 0.11
SSX2IPQ9Y2D8 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SSX2IPQ9Y2D8 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC15.71■□□□□ 0.11
SSX2IPQ9Y2D8 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC15.71■□□□□ 0.11
SSX2IPQ9Y2D8 PFN2-206ENST00000461930 606 ntTSL 4 BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms