Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.85□□□□□ -0.03
PHACTR1Q9C0D0 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC14.85□□□□□ -0.03
PHACTR1Q9C0D0 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
PHACTR1Q9C0D0 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.85□□□□□ -0.03
PHACTR1Q9C0D0 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14.85□□□□□ -0.03
PHACTR1Q9C0D0 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC14.85□□□□□ -0.03
PHACTR1Q9C0D0 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
PHACTR1Q9C0D0 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.85□□□□□ -0.03
PHACTR1Q9C0D0 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.85□□□□□ -0.03
PHACTR1Q9C0D0 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.85□□□□□ -0.03
PHACTR1Q9C0D0 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PHACTR1Q9C0D0 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
PHACTR1Q9C0D0 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC14.85□□□□□ -0.03
PHACTR1Q9C0D0 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC14.85□□□□□ -0.03
PHACTR1Q9C0D0 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
PHACTR1Q9C0D0 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PHACTR1Q9C0D0 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PHACTR1Q9C0D0 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC14.85□□□□□ -0.03
PHACTR1Q9C0D0 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
PHACTR1Q9C0D0 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PHACTR1Q9C0D0 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC14.85□□□□□ -0.03
PHACTR1Q9C0D0 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.85□□□□□ -0.03
PHACTR1Q9C0D0 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PHACTR1Q9C0D0 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC14.85□□□□□ -0.03
PHACTR1Q9C0D0 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
PHACTR1Q9C0D0 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PHACTR1Q9C0D0 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PHACTR1Q9C0D0 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
PHACTR1Q9C0D0 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PHACTR1Q9C0D0 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.85□□□□□ -0.03
PHACTR1Q9C0D0 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
PHACTR1Q9C0D0 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC14.85□□□□□ -0.03
PHACTR1Q9C0D0 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PHACTR1Q9C0D0 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PHACTR1Q9C0D0 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
PHACTR1Q9C0D0 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PHACTR1Q9C0D0 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
PHACTR1Q9C0D0 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PHACTR1Q9C0D0 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PHACTR1Q9C0D0 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC14.84□□□□□ -0.03
PHACTR1Q9C0D0 SLC6A6P1-201ENST00000413933 1850 ntBASIC14.84□□□□□ -0.03
PHACTR1Q9C0D0 AC020910.5-201ENST00000623668 1865 ntBASIC14.84□□□□□ -0.03
PHACTR1Q9C0D0 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PHACTR1Q9C0D0 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PHACTR1Q9C0D0 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PHACTR1Q9C0D0 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
PHACTR1Q9C0D0 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC14.84□□□□□ -0.03
PHACTR1Q9C0D0 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PHACTR1Q9C0D0 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
PHACTR1Q9C0D0 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PHACTR1Q9C0D0 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PHACTR1Q9C0D0 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC14.84□□□□□ -0.03
PHACTR1Q9C0D0 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PHACTR1Q9C0D0 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PHACTR1Q9C0D0 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
PHACTR1Q9C0D0 AL022313.4-201ENST00000562756 2046 ntBASIC14.84□□□□□ -0.03
PHACTR1Q9C0D0 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PHACTR1Q9C0D0 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PHACTR1Q9C0D0 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.84□□□□□ -0.03
PHACTR1Q9C0D0 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PHACTR1Q9C0D0 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
PHACTR1Q9C0D0 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PHACTR1Q9C0D0 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.84□□□□□ -0.03
PHACTR1Q9C0D0 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC14.84□□□□□ -0.03
PHACTR1Q9C0D0 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PHACTR1Q9C0D0 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.84□□□□□ -0.03
PHACTR1Q9C0D0 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
PHACTR1Q9C0D0 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PHACTR1Q9C0D0 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC14.84□□□□□ -0.03
PHACTR1Q9C0D0 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PHACTR1Q9C0D0 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PHACTR1Q9C0D0 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
PHACTR1Q9C0D0 AC011700.1-201ENST00000610409 2627 ntBASIC14.84□□□□□ -0.03
PHACTR1Q9C0D0 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PHACTR1Q9C0D0 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
PHACTR1Q9C0D0 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PHACTR1Q9C0D0 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
PHACTR1Q9C0D0 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
PHACTR1Q9C0D0 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
PHACTR1Q9C0D0 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC14.84□□□□□ -0.03
PHACTR1Q9C0D0 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PHACTR1Q9C0D0 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
PHACTR1Q9C0D0 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
PHACTR1Q9C0D0 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
PHACTR1Q9C0D0 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.83□□□□□ -0.03
PHACTR1Q9C0D0 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.03
PHACTR1Q9C0D0 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
PHACTR1Q9C0D0 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PHACTR1Q9C0D0 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PHACTR1Q9C0D0 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PHACTR1Q9C0D0 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PHACTR1Q9C0D0 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
PHACTR1Q9C0D0 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC14.83□□□□□ -0.03
PHACTR1Q9C0D0 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PHACTR1Q9C0D0 AC020658.7-201ENST00000624274 2442 ntBASIC14.83□□□□□ -0.04
PHACTR1Q9C0D0 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
PHACTR1Q9C0D0 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PHACTR1Q9C0D0 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PHACTR1Q9C0D0 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
PHACTR1Q9C0D0 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms