Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
USB1Q9BQ65 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
USB1Q9BQ65 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
USB1Q9BQ65 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
USB1Q9BQ65 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
USB1Q9BQ65 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.27□□□□□ -0.28
USB1Q9BQ65 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
USB1Q9BQ65 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
USB1Q9BQ65 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.27□□□□□ -0.28
USB1Q9BQ65 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
USB1Q9BQ65 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
USB1Q9BQ65 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
USB1Q9BQ65 PCDHA3-202ENST00000532566 4594 ntBASIC13.27□□□□□ -0.28
USB1Q9BQ65 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
USB1Q9BQ65 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
USB1Q9BQ65 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC13.27□□□□□ -0.29
USB1Q9BQ65 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
USB1Q9BQ65 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC13.27□□□□□ -0.29
USB1Q9BQ65 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
USB1Q9BQ65 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.27□□□□□ -0.29
USB1Q9BQ65 RFESDP1-201ENST00000422350 461 ntBASIC13.27□□□□□ -0.29
USB1Q9BQ65 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
USB1Q9BQ65 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC13.27□□□□□ -0.29
USB1Q9BQ65 AC026954.1-201ENST00000429771 1293 ntBASIC13.27□□□□□ -0.29
USB1Q9BQ65 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
USB1Q9BQ65 ACTBP11-201ENST00000436287 1126 ntBASIC13.27□□□□□ -0.29
USB1Q9BQ65 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
USB1Q9BQ65 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.27□□□□□ -0.29
USB1Q9BQ65 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC13.27□□□□□ -0.29
USB1Q9BQ65 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC13.27□□□□□ -0.29
USB1Q9BQ65 AC018635.1-201ENST00000468292 1030 ntBASIC13.27□□□□□ -0.29
USB1Q9BQ65 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC13.27□□□□□ -0.29
USB1Q9BQ65 AC092658.1-201ENST00000505836 891 ntBASIC13.27□□□□□ -0.29
USB1Q9BQ65 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC13.27□□□□□ -0.29
USB1Q9BQ65 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC13.27□□□□□ -0.29
USB1Q9BQ65 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
USB1Q9BQ65 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC13.27□□□□□ -0.29
USB1Q9BQ65 AC078819.1-201ENST00000547454 765 ntBASIC13.27□□□□□ -0.29
USB1Q9BQ65 AC012085.1-201ENST00000548270 765 ntBASIC13.27□□□□□ -0.29
USB1Q9BQ65 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC13.27□□□□□ -0.29
USB1Q9BQ65 AC103996.2-201ENST00000556763 915 ntTSL 3 BASIC13.27□□□□□ -0.29
USB1Q9BQ65 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC13.27□□□□□ -0.29
USB1Q9BQ65 DERL2-202ENST00000570848 657 ntTSL 5 BASIC13.27□□□□□ -0.29
USB1Q9BQ65 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC13.27□□□□□ -0.29
USB1Q9BQ65 METTL15-211ENST00000634762 718 ntTSL 5 BASIC13.27□□□□□ -0.29
USB1Q9BQ65 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
USB1Q9BQ65 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC13.27□□□□□ -0.29
USB1Q9BQ65 AL033527.4-201ENST00000641026 673 ntBASIC13.27□□□□□ -0.29
USB1Q9BQ65 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.27□□□□□ -0.29
USB1Q9BQ65 AL360270.3-201ENST00000609118 1348 ntBASIC13.27□□□□□ -0.29
USB1Q9BQ65 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
USB1Q9BQ65 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
USB1Q9BQ65 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
USB1Q9BQ65 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
USB1Q9BQ65 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.27□□□□□ -0.29
USB1Q9BQ65 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
USB1Q9BQ65 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC13.27□□□□□ -0.29
USB1Q9BQ65 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
USB1Q9BQ65 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
USB1Q9BQ65 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
USB1Q9BQ65 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.27□□□□□ -0.29
USB1Q9BQ65 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
USB1Q9BQ65 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
USB1Q9BQ65 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
USB1Q9BQ65 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
USB1Q9BQ65 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
USB1Q9BQ65 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.27□□□□□ -0.29
USB1Q9BQ65 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
USB1Q9BQ65 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
USB1Q9BQ65 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
USB1Q9BQ65 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.26□□□□□ -0.29
USB1Q9BQ65 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
USB1Q9BQ65 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.26□□□□□ -0.29
USB1Q9BQ65 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
USB1Q9BQ65 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
USB1Q9BQ65 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
USB1Q9BQ65 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
USB1Q9BQ65 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
USB1Q9BQ65 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
USB1Q9BQ65 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
USB1Q9BQ65 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.26□□□□□ -0.29
USB1Q9BQ65 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
USB1Q9BQ65 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
USB1Q9BQ65 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
USB1Q9BQ65 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
USB1Q9BQ65 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
USB1Q9BQ65 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
USB1Q9BQ65 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
USB1Q9BQ65 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
USB1Q9BQ65 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
USB1Q9BQ65 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
USB1Q9BQ65 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
USB1Q9BQ65 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
USB1Q9BQ65 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
USB1Q9BQ65 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
USB1Q9BQ65 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
USB1Q9BQ65 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
USB1Q9BQ65 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
USB1Q9BQ65 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
USB1Q9BQ65 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms