Protein–RNA interactions for Protein: Q96KA5

CLPTM1L, Cleft lip and palate transmembrane protein 1-like protein, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1LQ96KA5 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLPTM1LQ96KA5 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLPTM1LQ96KA5 AC136604.1-202ENST00000425471 771 ntBASIC14.04□□□□□ -0.16
CLPTM1LQ96KA5 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLPTM1LQ96KA5 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.04□□□□□ -0.16
CLPTM1LQ96KA5 AL591424.1-201ENST00000442569 1213 ntBASIC14.04□□□□□ -0.16
CLPTM1LQ96KA5 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.04□□□□□ -0.16
CLPTM1LQ96KA5 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.04□□□□□ -0.16
CLPTM1LQ96KA5 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.04□□□□□ -0.16
CLPTM1LQ96KA5 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.04□□□□□ -0.16
CLPTM1LQ96KA5 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.04□□□□□ -0.16
CLPTM1LQ96KA5 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.04□□□□□ -0.16
CLPTM1LQ96KA5 AC138761.1-201ENST00000584393 385 ntBASIC14.04□□□□□ -0.16
CLPTM1LQ96KA5 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLPTM1LQ96KA5 AC027601.4-201ENST00000611259 610 ntBASIC14.04□□□□□ -0.16
CLPTM1LQ96KA5 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLPTM1LQ96KA5 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLPTM1LQ96KA5 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC14.04□□□□□ -0.16
CLPTM1LQ96KA5 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLPTM1LQ96KA5 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.04□□□□□ -0.16
CLPTM1LQ96KA5 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC14.04□□□□□ -0.16
CLPTM1LQ96KA5 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC14.04□□□□□ -0.16
CLPTM1LQ96KA5 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CLPTM1LQ96KA5 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.04□□□□□ -0.16
CLPTM1LQ96KA5 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLPTM1LQ96KA5 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLPTM1LQ96KA5 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLPTM1LQ96KA5 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC14.04□□□□□ -0.16
CLPTM1LQ96KA5 AL138799.1-201ENST00000448213 1675 ntBASIC14.04□□□□□ -0.16
CLPTM1LQ96KA5 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLPTM1LQ96KA5 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLPTM1LQ96KA5 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLPTM1LQ96KA5 MARK2P9-201ENST00000430958 1727 ntBASIC14.04□□□□□ -0.16
CLPTM1LQ96KA5 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CLPTM1LQ96KA5 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CLPTM1LQ96KA5 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLPTM1LQ96KA5 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
CLPTM1LQ96KA5 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLPTM1LQ96KA5 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLPTM1LQ96KA5 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLPTM1LQ96KA5 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CLPTM1LQ96KA5 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CLPTM1LQ96KA5 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CLPTM1LQ96KA5 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLPTM1LQ96KA5 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC14.03□□□□□ -0.16
CLPTM1LQ96KA5 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC14.03□□□□□ -0.16
CLPTM1LQ96KA5 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLPTM1LQ96KA5 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC14.03□□□□□ -0.16
CLPTM1LQ96KA5 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLPTM1LQ96KA5 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLPTM1LQ96KA5 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLPTM1LQ96KA5 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLPTM1LQ96KA5 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
CLPTM1LQ96KA5 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC14.03□□□□□ -0.16
CLPTM1LQ96KA5 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLPTM1LQ96KA5 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CLPTM1LQ96KA5 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLPTM1LQ96KA5 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CLPTM1LQ96KA5 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLPTM1LQ96KA5 AL645937.2-201ENST00000396808 931 ntBASIC14.03□□□□□ -0.16
CLPTM1LQ96KA5 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.03□□□□□ -0.16
CLPTM1LQ96KA5 AL627223.1-201ENST00000416693 442 ntBASIC14.03□□□□□ -0.16
CLPTM1LQ96KA5 AC007969.1-201ENST00000433675 447 ntBASIC14.03□□□□□ -0.16
CLPTM1LQ96KA5 SLC25A1P1-201ENST00000528351 927 ntBASIC14.03□□□□□ -0.16
CLPTM1LQ96KA5 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CLPTM1LQ96KA5 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.03□□□□□ -0.16
CLPTM1LQ96KA5 AC010336.2-201ENST00000564226 506 ntBASIC14.03□□□□□ -0.16
CLPTM1LQ96KA5 AC040169.1-201ENST00000565382 521 ntBASIC14.03□□□□□ -0.16
CLPTM1LQ96KA5 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CLPTM1LQ96KA5 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.03□□□□□ -0.16
CLPTM1LQ96KA5 MIR6080-201ENST00000617359 66 ntBASIC14.03□□□□□ -0.16
CLPTM1LQ96KA5 ZNF259P1-201ENST00000407656 1365 ntBASIC14.03□□□□□ -0.16
CLPTM1LQ96KA5 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLPTM1LQ96KA5 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.03□□□□□ -0.16
CLPTM1LQ96KA5 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CLPTM1LQ96KA5 POM121L14P-201ENST00000406100 1558 ntBASIC14.03□□□□□ -0.16
CLPTM1LQ96KA5 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLPTM1LQ96KA5 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLPTM1LQ96KA5 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CLPTM1LQ96KA5 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC14.03□□□□□ -0.16
CLPTM1LQ96KA5 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CLPTM1LQ96KA5 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CLPTM1LQ96KA5 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLPTM1LQ96KA5 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLPTM1LQ96KA5 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
CLPTM1LQ96KA5 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CLPTM1LQ96KA5 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC14.03□□□□□ -0.16
CLPTM1LQ96KA5 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLPTM1LQ96KA5 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLPTM1LQ96KA5 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC14.03□□□□□ -0.16
CLPTM1LQ96KA5 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLPTM1LQ96KA5 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CLPTM1LQ96KA5 STK40-201ENST00000359297 4837 ntTSL 2 BASIC14.03□□□□□ -0.16
CLPTM1LQ96KA5 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLPTM1LQ96KA5 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLPTM1LQ96KA5 TET3-201ENST00000305799 5174 ntTSL 5 BASIC14.02□□□□□ -0.16
CLPTM1LQ96KA5 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLPTM1LQ96KA5 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLPTM1LQ96KA5 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLPTM1LQ96KA5 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms