Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
FOXRED1Q96CU9 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
FOXRED1Q96CU9 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC12.78□□□□□ -0.36
FOXRED1Q96CU9 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC12.78□□□□□ -0.36
FOXRED1Q96CU9 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC12.78□□□□□ -0.36
FOXRED1Q96CU9 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
FOXRED1Q96CU9 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
FOXRED1Q96CU9 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
FOXRED1Q96CU9 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
FOXRED1Q96CU9 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC12.78□□□□□ -0.36
FOXRED1Q96CU9 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
FOXRED1Q96CU9 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
FOXRED1Q96CU9 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
FOXRED1Q96CU9 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
FOXRED1Q96CU9 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC12.78□□□□□ -0.36
FOXRED1Q96CU9 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
FOXRED1Q96CU9 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
FOXRED1Q96CU9 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC12.78□□□□□ -0.36
FOXRED1Q96CU9 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC12.78□□□□□ -0.36
FOXRED1Q96CU9 AC073548.1-201ENST00000624088 1882 ntBASIC12.78□□□□□ -0.36
FOXRED1Q96CU9 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
FOXRED1Q96CU9 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
FOXRED1Q96CU9 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
FOXRED1Q96CU9 MAPT-IT1-201ENST00000624111 3016 ntBASIC12.78□□□□□ -0.36
FOXRED1Q96CU9 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
FOXRED1Q96CU9 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
FOXRED1Q96CU9 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
FOXRED1Q96CU9 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC12.77□□□□□ -0.36
FOXRED1Q96CU9 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
FOXRED1Q96CU9 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC12.77□□□□□ -0.36
FOXRED1Q96CU9 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC12.77□□□□□ -0.36
FOXRED1Q96CU9 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
FOXRED1Q96CU9 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
FOXRED1Q96CU9 AC023794.5-201ENST00000564380 2157 ntBASIC12.77□□□□□ -0.36
FOXRED1Q96CU9 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC12.77□□□□□ -0.36
FOXRED1Q96CU9 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
FOXRED1Q96CU9 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
FOXRED1Q96CU9 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
FOXRED1Q96CU9 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
FOXRED1Q96CU9 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
FOXRED1Q96CU9 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
FOXRED1Q96CU9 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
FOXRED1Q96CU9 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
FOXRED1Q96CU9 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC12.77□□□□□ -0.37
FOXRED1Q96CU9 SPDYE19P-201ENST00000338590 713 ntBASIC12.77□□□□□ -0.37
FOXRED1Q96CU9 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
FOXRED1Q96CU9 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
FOXRED1Q96CU9 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
FOXRED1Q96CU9 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC12.77□□□□□ -0.37
FOXRED1Q96CU9 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
FOXRED1Q96CU9 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
FOXRED1Q96CU9 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC12.77□□□□□ -0.37
FOXRED1Q96CU9 AC134915.1-201ENST00000426461 574 ntBASIC12.77□□□□□ -0.37
FOXRED1Q96CU9 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC12.77□□□□□ -0.37
FOXRED1Q96CU9 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC12.77□□□□□ -0.37
FOXRED1Q96CU9 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
FOXRED1Q96CU9 ARL16-202ENST00000570561 768 ntTSL 2 BASIC12.77□□□□□ -0.37
FOXRED1Q96CU9 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC12.77□□□□□ -0.37
FOXRED1Q96CU9 AC138761.1-201ENST00000584393 385 ntBASIC12.77□□□□□ -0.37
FOXRED1Q96CU9 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC12.77□□□□□ -0.37
FOXRED1Q96CU9 BRI3BPP1-201ENST00000594224 787 ntBASIC12.77□□□□□ -0.37
FOXRED1Q96CU9 AC099568.2-201ENST00000609194 695 ntBASIC12.77□□□□□ -0.37
FOXRED1Q96CU9 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC12.77□□□□□ -0.37
FOXRED1Q96CU9 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC12.77□□□□□ -0.37
FOXRED1Q96CU9 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
FOXRED1Q96CU9 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
FOXRED1Q96CU9 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
FOXRED1Q96CU9 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
FOXRED1Q96CU9 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
FOXRED1Q96CU9 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
FOXRED1Q96CU9 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
FOXRED1Q96CU9 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
FOXRED1Q96CU9 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC12.77□□□□□ -0.37
FOXRED1Q96CU9 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
FOXRED1Q96CU9 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC12.77□□□□□ -0.37
FOXRED1Q96CU9 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
FOXRED1Q96CU9 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
FOXRED1Q96CU9 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
FOXRED1Q96CU9 LRRC59-203ENST00000576448 1531 ntBASIC12.77□□□□□ -0.37
FOXRED1Q96CU9 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
FOXRED1Q96CU9 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
FOXRED1Q96CU9 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
FOXRED1Q96CU9 AC105206.1-202ENST00000314927 2368 ntBASIC12.77□□□□□ -0.37
FOXRED1Q96CU9 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
FOXRED1Q96CU9 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
FOXRED1Q96CU9 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
FOXRED1Q96CU9 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
FOXRED1Q96CU9 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
FOXRED1Q96CU9 AL023775.1-201ENST00000454907 1746 ntBASIC12.76□□□□□ -0.37
FOXRED1Q96CU9 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
FOXRED1Q96CU9 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
FOXRED1Q96CU9 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
FOXRED1Q96CU9 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
FOXRED1Q96CU9 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
FOXRED1Q96CU9 DDC-213ENST00000617822 1809 ntTSL 3 BASIC12.76□□□□□ -0.37
FOXRED1Q96CU9 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
FOXRED1Q96CU9 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
FOXRED1Q96CU9 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
FOXRED1Q96CU9 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC12.76□□□□□ -0.37
FOXRED1Q96CU9 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms