Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRAF3IP1Q8TDR0 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC15.27■□□□□ 0.04
TRAF3IP1Q8TDR0 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC15.27■□□□□ 0.04
TRAF3IP1Q8TDR0 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAF3IP1Q8TDR0 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC15.27■□□□□ 0.04
TRAF3IP1Q8TDR0 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAF3IP1Q8TDR0 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC15.27■□□□□ 0.04
TRAF3IP1Q8TDR0 TMEM14DP-201ENST00000422205 345 ntBASIC15.27■□□□□ 0.04
TRAF3IP1Q8TDR0 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.27■□□□□ 0.04
TRAF3IP1Q8TDR0 KRT43P-201ENST00000434019 910 ntBASIC15.27■□□□□ 0.04
TRAF3IP1Q8TDR0 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
TRAF3IP1Q8TDR0 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.27■□□□□ 0.04
TRAF3IP1Q8TDR0 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.27■□□□□ 0.04
TRAF3IP1Q8TDR0 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC15.27■□□□□ 0.04
TRAF3IP1Q8TDR0 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.27■□□□□ 0.04
TRAF3IP1Q8TDR0 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.27■□□□□ 0.04
TRAF3IP1Q8TDR0 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.27■□□□□ 0.04
TRAF3IP1Q8TDR0 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.27■□□□□ 0.04
TRAF3IP1Q8TDR0 AP001002.3-201ENST00000623482 206 ntBASIC15.27■□□□□ 0.04
TRAF3IP1Q8TDR0 AC002472.3-201ENST00000640124 621 ntBASIC15.27■□□□□ 0.04
TRAF3IP1Q8TDR0 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAF3IP1Q8TDR0 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.27■□□□□ 0.03
TRAF3IP1Q8TDR0 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAF3IP1Q8TDR0 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAF3IP1Q8TDR0 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAF3IP1Q8TDR0 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TRAF3IP1Q8TDR0 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAF3IP1Q8TDR0 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
TRAF3IP1Q8TDR0 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAF3IP1Q8TDR0 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC15.27■□□□□ 0.03
TRAF3IP1Q8TDR0 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAF3IP1Q8TDR0 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAF3IP1Q8TDR0 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAF3IP1Q8TDR0 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TRAF3IP1Q8TDR0 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC15.27■□□□□ 0.03
TRAF3IP1Q8TDR0 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAF3IP1Q8TDR0 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TRAF3IP1Q8TDR0 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAF3IP1Q8TDR0 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAF3IP1Q8TDR0 FP325330.2-201ENST00000624219 5630 ntBASIC15.27■□□□□ 0.03
TRAF3IP1Q8TDR0 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC15.27■□□□□ 0.03
TRAF3IP1Q8TDR0 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAF3IP1Q8TDR0 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TRAF3IP1Q8TDR0 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAF3IP1Q8TDR0 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
TRAF3IP1Q8TDR0 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAF3IP1Q8TDR0 KHSRPP1-201ENST00000427983 1768 ntBASIC15.26■□□□□ 0.03
TRAF3IP1Q8TDR0 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAF3IP1Q8TDR0 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAF3IP1Q8TDR0 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAF3IP1Q8TDR0 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAF3IP1Q8TDR0 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAF3IP1Q8TDR0 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAF3IP1Q8TDR0 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAF3IP1Q8TDR0 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAF3IP1Q8TDR0 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TRAF3IP1Q8TDR0 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAF3IP1Q8TDR0 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TRAF3IP1Q8TDR0 AC011498.7-201ENST00000624986 2027 ntBASIC15.26■□□□□ 0.03
TRAF3IP1Q8TDR0 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
TRAF3IP1Q8TDR0 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAF3IP1Q8TDR0 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAF3IP1Q8TDR0 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15.26■□□□□ 0.03
TRAF3IP1Q8TDR0 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAF3IP1Q8TDR0 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAF3IP1Q8TDR0 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC15.26■□□□□ 0.03
TRAF3IP1Q8TDR0 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAF3IP1Q8TDR0 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TRAF3IP1Q8TDR0 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAF3IP1Q8TDR0 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.26■□□□□ 0.03
TRAF3IP1Q8TDR0 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TRAF3IP1Q8TDR0 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
TRAF3IP1Q8TDR0 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.26■□□□□ 0.03
TRAF3IP1Q8TDR0 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC15.26■□□□□ 0.03
TRAF3IP1Q8TDR0 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.26■□□□□ 0.03
TRAF3IP1Q8TDR0 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC15.26■□□□□ 0.03
TRAF3IP1Q8TDR0 AP005018.1-201ENST00000525475 301 ntBASIC15.26■□□□□ 0.03
TRAF3IP1Q8TDR0 RPL8-205ENST00000527914 551 ntTSL 3 BASIC15.26■□□□□ 0.03
TRAF3IP1Q8TDR0 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.26■□□□□ 0.03
TRAF3IP1Q8TDR0 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC15.26■□□□□ 0.03
TRAF3IP1Q8TDR0 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.26■□□□□ 0.03
TRAF3IP1Q8TDR0 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAF3IP1Q8TDR0 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.26■□□□□ 0.03
TRAF3IP1Q8TDR0 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.26■□□□□ 0.03
TRAF3IP1Q8TDR0 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAF3IP1Q8TDR0 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC15.26■□□□□ 0.03
TRAF3IP1Q8TDR0 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TRAF3IP1Q8TDR0 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAF3IP1Q8TDR0 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC15.26■□□□□ 0.03
TRAF3IP1Q8TDR0 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAF3IP1Q8TDR0 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC15.26■□□□□ 0.03
TRAF3IP1Q8TDR0 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TRAF3IP1Q8TDR0 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAF3IP1Q8TDR0 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAF3IP1Q8TDR0 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
TRAF3IP1Q8TDR0 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC15.26■□□□□ 0.03
TRAF3IP1Q8TDR0 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAF3IP1Q8TDR0 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAF3IP1Q8TDR0 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAF3IP1Q8TDR0 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms