Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC17.07■□□□□ 0.32
SMARCC2Q8TAQ2 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMARCC2Q8TAQ2 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SMARCC2Q8TAQ2 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC17.07■□□□□ 0.32
SMARCC2Q8TAQ2 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMARCC2Q8TAQ2 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SMARCC2Q8TAQ2 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC17.06■□□□□ 0.32
SMARCC2Q8TAQ2 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
SMARCC2Q8TAQ2 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
SMARCC2Q8TAQ2 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMARCC2Q8TAQ2 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMARCC2Q8TAQ2 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC17.06■□□□□ 0.32
SMARCC2Q8TAQ2 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SMARCC2Q8TAQ2 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMARCC2Q8TAQ2 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMARCC2Q8TAQ2 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC17.06■□□□□ 0.32
SMARCC2Q8TAQ2 AC009093.10-201ENST00000641956 1442 ntBASIC17.06■□□□□ 0.32
SMARCC2Q8TAQ2 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMARCC2Q8TAQ2 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMARCC2Q8TAQ2 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMARCC2Q8TAQ2 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMARCC2Q8TAQ2 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SMARCC2Q8TAQ2 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
SMARCC2Q8TAQ2 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC17.06■□□□□ 0.32
SMARCC2Q8TAQ2 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC17.06■□□□□ 0.32
SMARCC2Q8TAQ2 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SMARCC2Q8TAQ2 AC010141.1-201ENST00000411585 623 ntBASIC17.06■□□□□ 0.32
SMARCC2Q8TAQ2 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC17.06■□□□□ 0.32
SMARCC2Q8TAQ2 PTPA-215ENST00000432124 567 ntTSL 4 BASIC17.06■□□□□ 0.32
SMARCC2Q8TAQ2 AL161932.2-201ENST00000435436 679 ntBASIC17.06■□□□□ 0.32
SMARCC2Q8TAQ2 AC104306.2-201ENST00000451877 341 ntBASIC17.06■□□□□ 0.32
SMARCC2Q8TAQ2 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC17.06■□□□□ 0.32
SMARCC2Q8TAQ2 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMARCC2Q8TAQ2 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
SMARCC2Q8TAQ2 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC17.06■□□□□ 0.32
SMARCC2Q8TAQ2 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SMARCC2Q8TAQ2 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC17.06■□□□□ 0.32
SMARCC2Q8TAQ2 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC17.06■□□□□ 0.32
SMARCC2Q8TAQ2 AC104506.1-201ENST00000609247 429 ntBASIC17.06■□□□□ 0.32
SMARCC2Q8TAQ2 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC17.06■□□□□ 0.32
SMARCC2Q8TAQ2 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMARCC2Q8TAQ2 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMARCC2Q8TAQ2 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SMARCC2Q8TAQ2 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SMARCC2Q8TAQ2 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
SMARCC2Q8TAQ2 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMARCC2Q8TAQ2 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SMARCC2Q8TAQ2 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMARCC2Q8TAQ2 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMARCC2Q8TAQ2 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMARCC2Q8TAQ2 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMARCC2Q8TAQ2 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC17.06■□□□□ 0.32
SMARCC2Q8TAQ2 CICP4-201ENST00000447359 2812 ntBASIC17.06■□□□□ 0.32
SMARCC2Q8TAQ2 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMARCC2Q8TAQ2 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
SMARCC2Q8TAQ2 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMARCC2Q8TAQ2 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SMARCC2Q8TAQ2 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMARCC2Q8TAQ2 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SMARCC2Q8TAQ2 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMARCC2Q8TAQ2 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SMARCC2Q8TAQ2 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SMARCC2Q8TAQ2 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC17.05■□□□□ 0.32
SMARCC2Q8TAQ2 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SMARCC2Q8TAQ2 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC17.05■□□□□ 0.32
SMARCC2Q8TAQ2 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMARCC2Q8TAQ2 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
SMARCC2Q8TAQ2 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC17.05■□□□□ 0.32
SMARCC2Q8TAQ2 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
SMARCC2Q8TAQ2 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMARCC2Q8TAQ2 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SMARCC2Q8TAQ2 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMARCC2Q8TAQ2 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SMARCC2Q8TAQ2 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC17.05■□□□□ 0.32
SMARCC2Q8TAQ2 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SMARCC2Q8TAQ2 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SMARCC2Q8TAQ2 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SMARCC2Q8TAQ2 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC17.05■□□□□ 0.32
SMARCC2Q8TAQ2 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC17.05■□□□□ 0.32
SMARCC2Q8TAQ2 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMARCC2Q8TAQ2 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SMARCC2Q8TAQ2 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC17.05■□□□□ 0.32
SMARCC2Q8TAQ2 FAM8A2P-201ENST00000528813 1142 ntBASIC17.05■□□□□ 0.32
SMARCC2Q8TAQ2 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC17.05■□□□□ 0.32
SMARCC2Q8TAQ2 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMARCC2Q8TAQ2 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC17.05■□□□□ 0.32
SMARCC2Q8TAQ2 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC17.05■□□□□ 0.32
SMARCC2Q8TAQ2 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMARCC2Q8TAQ2 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMARCC2Q8TAQ2 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
SMARCC2Q8TAQ2 MBLAC2-202ENST00000514906 1936 ntBASIC17.05■□□□□ 0.32
SMARCC2Q8TAQ2 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC17.05■□□□□ 0.32
SMARCC2Q8TAQ2 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMARCC2Q8TAQ2 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
SMARCC2Q8TAQ2 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMARCC2Q8TAQ2 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC17.05■□□□□ 0.32
SMARCC2Q8TAQ2 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMARCC2Q8TAQ2 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMARCC2Q8TAQ2 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMARCC2Q8TAQ2 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms