Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.5□□□□□ -0.09
RFWD2Q8NHY2 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RFWD2Q8NHY2 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RFWD2Q8NHY2 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RFWD2Q8NHY2 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RFWD2Q8NHY2 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC14.49□□□□□ -0.09
RFWD2Q8NHY2 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RFWD2Q8NHY2 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RFWD2Q8NHY2 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
RFWD2Q8NHY2 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
RFWD2Q8NHY2 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
RFWD2Q8NHY2 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
RFWD2Q8NHY2 AC118758.2-201ENST00000614242 2813 ntBASIC14.49□□□□□ -0.09
RFWD2Q8NHY2 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC14.49□□□□□ -0.09
RFWD2Q8NHY2 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
RFWD2Q8NHY2 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC14.49□□□□□ -0.09
RFWD2Q8NHY2 AP002761.4-201ENST00000565433 3361 ntBASIC14.49□□□□□ -0.09
RFWD2Q8NHY2 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC14.49□□□□□ -0.09
RFWD2Q8NHY2 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC14.49□□□□□ -0.09
RFWD2Q8NHY2 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.49□□□□□ -0.09
RFWD2Q8NHY2 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
RFWD2Q8NHY2 AL139385.1-201ENST00000611744 3272 ntBASIC14.49□□□□□ -0.09
RFWD2Q8NHY2 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
RFWD2Q8NHY2 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
RFWD2Q8NHY2 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
RFWD2Q8NHY2 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.49□□□□□ -0.09
RFWD2Q8NHY2 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RFWD2Q8NHY2 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.49□□□□□ -0.09
RFWD2Q8NHY2 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
RFWD2Q8NHY2 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.49□□□□□ -0.09
RFWD2Q8NHY2 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.49□□□□□ -0.09
RFWD2Q8NHY2 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.49□□□□□ -0.09
RFWD2Q8NHY2 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RFWD2Q8NHY2 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RFWD2Q8NHY2 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.49□□□□□ -0.09
RFWD2Q8NHY2 AC140878.1-201ENST00000565277 250 ntBASIC14.49□□□□□ -0.09
RFWD2Q8NHY2 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.49□□□□□ -0.09
RFWD2Q8NHY2 AC107373.2-201ENST00000607735 490 ntBASIC14.49□□□□□ -0.09
RFWD2Q8NHY2 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.49□□□□□ -0.09
RFWD2Q8NHY2 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
RFWD2Q8NHY2 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.49□□□□□ -0.09
RFWD2Q8NHY2 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
RFWD2Q8NHY2 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RFWD2Q8NHY2 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
RFWD2Q8NHY2 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RFWD2Q8NHY2 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.49□□□□□ -0.09
RFWD2Q8NHY2 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC14.49□□□□□ -0.09
RFWD2Q8NHY2 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC14.49□□□□□ -0.09
RFWD2Q8NHY2 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RFWD2Q8NHY2 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
RFWD2Q8NHY2 AC003102.2-201ENST00000589195 1469 ntBASIC14.49□□□□□ -0.09
RFWD2Q8NHY2 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RFWD2Q8NHY2 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
RFWD2Q8NHY2 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC14.49□□□□□ -0.09
RFWD2Q8NHY2 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC14.49□□□□□ -0.09
RFWD2Q8NHY2 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RFWD2Q8NHY2 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
RFWD2Q8NHY2 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
RFWD2Q8NHY2 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RFWD2Q8NHY2 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RFWD2Q8NHY2 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC14.48□□□□□ -0.09
RFWD2Q8NHY2 AC135782.3-201ENST00000562782 2105 ntBASIC14.48□□□□□ -0.09
RFWD2Q8NHY2 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
RFWD2Q8NHY2 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RFWD2Q8NHY2 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
RFWD2Q8NHY2 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RFWD2Q8NHY2 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RFWD2Q8NHY2 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RFWD2Q8NHY2 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
RFWD2Q8NHY2 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RFWD2Q8NHY2 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RFWD2Q8NHY2 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
RFWD2Q8NHY2 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RFWD2Q8NHY2 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RFWD2Q8NHY2 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
RFWD2Q8NHY2 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RFWD2Q8NHY2 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
RFWD2Q8NHY2 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RFWD2Q8NHY2 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RFWD2Q8NHY2 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RFWD2Q8NHY2 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RFWD2Q8NHY2 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RFWD2Q8NHY2 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RFWD2Q8NHY2 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.48□□□□□ -0.09
RFWD2Q8NHY2 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.48□□□□□ -0.09
RFWD2Q8NHY2 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.48□□□□□ -0.09
RFWD2Q8NHY2 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RFWD2Q8NHY2 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.48□□□□□ -0.09
RFWD2Q8NHY2 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RFWD2Q8NHY2 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.48□□□□□ -0.09
RFWD2Q8NHY2 DUX4L27-201ENST00000554796 1261 ntBASIC14.48□□□□□ -0.09
RFWD2Q8NHY2 AC044860.1-202ENST00000559481 777 ntBASIC14.48□□□□□ -0.09
RFWD2Q8NHY2 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.48□□□□□ -0.09
RFWD2Q8NHY2 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.48□□□□□ -0.09
RFWD2Q8NHY2 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RFWD2Q8NHY2 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
RFWD2Q8NHY2 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
RFWD2Q8NHY2 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RFWD2Q8NHY2 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
RFWD2Q8NHY2 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms