Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.65■□□□□ 0.1
BEST2Q8NFU1 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BEST2Q8NFU1 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.65■□□□□ 0.1
BEST2Q8NFU1 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
BEST2Q8NFU1 LINC02228-204ENST00000642115 2962 ntBASIC15.65■□□□□ 0.1
BEST2Q8NFU1 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
BEST2Q8NFU1 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BEST2Q8NFU1 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
BEST2Q8NFU1 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
BEST2Q8NFU1 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
BEST2Q8NFU1 OR2R1P-201ENST00000441404 914 ntBASIC15.65■□□□□ 0.1
BEST2Q8NFU1 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC15.65■□□□□ 0.1
BEST2Q8NFU1 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC15.65■□□□□ 0.1
BEST2Q8NFU1 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC15.65■□□□□ 0.1
BEST2Q8NFU1 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC15.65■□□□□ 0.1
BEST2Q8NFU1 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC15.65■□□□□ 0.1
BEST2Q8NFU1 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC15.65■□□□□ 0.1
BEST2Q8NFU1 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC15.65■□□□□ 0.1
BEST2Q8NFU1 AC021016.3-201ENST00000608367 477 ntBASIC15.65■□□□□ 0.1
BEST2Q8NFU1 AC097724.1-201ENST00000609581 426 ntBASIC15.65■□□□□ 0.1
BEST2Q8NFU1 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC15.65■□□□□ 0.1
BEST2Q8NFU1 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
BEST2Q8NFU1 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
BEST2Q8NFU1 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
BEST2Q8NFU1 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
BEST2Q8NFU1 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
BEST2Q8NFU1 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BEST2Q8NFU1 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
BEST2Q8NFU1 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
BEST2Q8NFU1 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
BEST2Q8NFU1 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BEST2Q8NFU1 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.65■□□□□ 0.1
BEST2Q8NFU1 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BEST2Q8NFU1 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BEST2Q8NFU1 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BEST2Q8NFU1 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC15.65■□□□□ 0.1
BEST2Q8NFU1 AC140479.7-201ENST00000636301 2332 ntBASIC15.65■□□□□ 0.1
BEST2Q8NFU1 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BEST2Q8NFU1 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.64■□□□□ 0.09
BEST2Q8NFU1 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
BEST2Q8NFU1 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.64■□□□□ 0.09
BEST2Q8NFU1 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.64■□□□□ 0.09
BEST2Q8NFU1 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
BEST2Q8NFU1 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
BEST2Q8NFU1 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
BEST2Q8NFU1 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC15.64■□□□□ 0.09
BEST2Q8NFU1 AC008132.1-202ENST00000342005 1389 ntBASIC15.64■□□□□ 0.09
BEST2Q8NFU1 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
BEST2Q8NFU1 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
BEST2Q8NFU1 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC15.64■□□□□ 0.09
BEST2Q8NFU1 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
BEST2Q8NFU1 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
BEST2Q8NFU1 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
BEST2Q8NFU1 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
BEST2Q8NFU1 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
BEST2Q8NFU1 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
BEST2Q8NFU1 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
BEST2Q8NFU1 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
BEST2Q8NFU1 AC239868.1-201ENST00000369385 493 ntBASIC15.64■□□□□ 0.09
BEST2Q8NFU1 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC15.64■□□□□ 0.09
BEST2Q8NFU1 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC15.64■□□□□ 0.09
BEST2Q8NFU1 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
BEST2Q8NFU1 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC15.64■□□□□ 0.09
BEST2Q8NFU1 AL161932.2-201ENST00000435436 679 ntBASIC15.64■□□□□ 0.09
BEST2Q8NFU1 RN7SL769P-201ENST00000469386 295 ntBASIC15.64■□□□□ 0.09
BEST2Q8NFU1 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC15.64■□□□□ 0.09
BEST2Q8NFU1 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC15.64■□□□□ 0.09
BEST2Q8NFU1 AC024681.1-201ENST00000521917 487 ntBASIC15.64■□□□□ 0.09
BEST2Q8NFU1 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC15.64■□□□□ 0.09
BEST2Q8NFU1 AL161670.2-201ENST00000557650 1227 ntBASIC15.64■□□□□ 0.09
BEST2Q8NFU1 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
BEST2Q8NFU1 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC15.64■□□□□ 0.09
BEST2Q8NFU1 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC15.64■□□□□ 0.09
BEST2Q8NFU1 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC15.64■□□□□ 0.09
BEST2Q8NFU1 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
BEST2Q8NFU1 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
BEST2Q8NFU1 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC15.64■□□□□ 0.09
BEST2Q8NFU1 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC15.64■□□□□ 0.09
BEST2Q8NFU1 CU633904.3-201ENST00000624042 1029 ntBASIC15.64■□□□□ 0.09
BEST2Q8NFU1 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
BEST2Q8NFU1 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC15.64■□□□□ 0.09
BEST2Q8NFU1 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
BEST2Q8NFU1 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
BEST2Q8NFU1 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
BEST2Q8NFU1 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.64■□□□□ 0.09
BEST2Q8NFU1 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC15.64■□□□□ 0.09
BEST2Q8NFU1 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
BEST2Q8NFU1 STK26-204ENST00000481105 1835 ntTSL 2 BASIC15.64■□□□□ 0.09
BEST2Q8NFU1 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
BEST2Q8NFU1 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.63■□□□□ 0.09
BEST2Q8NFU1 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
BEST2Q8NFU1 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
BEST2Q8NFU1 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
BEST2Q8NFU1 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
BEST2Q8NFU1 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
BEST2Q8NFU1 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
BEST2Q8NFU1 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
BEST2Q8NFU1 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
BEST2Q8NFU1 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
BEST2Q8NFU1 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms